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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482250   DEAD-box ATP-dependent RNA helicase 35 
 mtr-r.5   25482250   DEAD-box ATP-dependent RNA helicase 35 
 mtr-u.5   11422418   DEAD-box ATP-dependent RNA helicase 35 
 gma-u.5   100819984   DEAD-box ATP-dependent RNA helicase 35 
 gma-u.5   100814127   DEAD-box ATP-dependent RNA helicase 35 
 ppo-u.5   18098319   DEAD-box ATP-dependent RNA helicase 35 
 ath-u.5   AT5G51280   DEAD-box protein abstrakt 
 vvi-u.5   100249809   DEAD-box ATP-dependent RNA helicase 35 
 sly-u.5   101260827   DEAD-box ATP-dependent RNA helicase 35 
 sly-u.5   101259928   DEAD-box ATP-dependent RNA helicase 35 
 osa-u.5   4341945   DEAD-box ATP-dependent RNA helicase 35B 
 osa-u.5   4328308   DEAD-box ATP-dependent RNA helicase 35A-like 
 zma-u.5   100281463   ATP-dependent RNA helicase DDX41 

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Top 50 coexpressed genes to 25482250 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25482250 (mtr-u.5 coexpression data)

CoexMap"25482250"


mtrLOC25482250 | Entrez gene ID : 25482250      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (155 genes)  IEA  
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (72 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4267 genes)  IEA  
Protein XP_013466251.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_013466251.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013466251.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482250
mtr-r.5
for
25482250
mtr-u.5
for
11422418
gma-u.5
for
100819984
gma-u.5
for
100814127
ppo-u.5
for
18098319
ath-u.5
for
AT5G51280
vvi-u.5
for
100249809
sly-u.5
for
101260827
sly-u.5
for
101259928
osa-u.5
for
4341945
osa-u.5
for
4328308
zma-u.5
for
100281463


Ortholog ID: 4964
Species mtr mtr gma gma ppo ath bra bra vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma tae hvu sbi bdi cre
Symbol LOC25482250 LOC11422418 LOC100819984 LOC100814127 LOC18098319 AT5G51280 LOC103832481 LOC103830438 LOC100249809 LOC121229337 LOC107906446 LOC106430758 LOC106368824 LOC102625582 LOC101260827 LOC101259928 LOC102601744 LOC102582464 LOC107819814 LOC107778704 LOC4328308 LOC4341945 LOC100281463 LOC123069027 LOC123443001 LOC8082312 LOC100828701 CHLRE_07g334200v5
Function* DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box protein abstrakt DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35-like DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35 DEAD-box ATP-dependent RNA helicase 35A-like DEAD-box ATP-dependent RNA helicase 35B ATP-dependent RNA helicase DDX41 DEAD-box ATP-dependent RNA helicase 35A DEAD-box ATP-dependent RNA helicase 35A DEAD-box ATP-dependent RNA helicase 35A DEAD-box ATP-dependent RNA helicase 35A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00770 Pantothenate and CoA biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03082 ATP-dependent chromatin remodeling 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25482250 11422418 100819984 100814127 18098319 835202 103832481 103830438 100249809 121229337 107906446 106430758 106368824 102625582 101260827 101259928 102601744 102582464 107819814 107778704 4328308 4341945 100281463 123069027 123443001 8082312 100828701 5725715
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