ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25482951	protein argonaute 10
mtr-r.5	25482951	protein argonaute 10
mtr-u.5	11409042	protein argonaute PNH1
mtr-u.5	25485122	protein argonaute 10
gma-u.5	100819073	protein argonaute 10
gma-u.5	100816999	protein argonaute 10
gma-u.5	100813485	protein argonaute PNH1
ppo-u.5	18105620	protein argonaute 1-like
ppo-u.5	7454033	protein argonaute 1
ppo-u.5	7463340	protein argonaute 5
ath-u.5	AGO5	Argonaute family protein
ath-u.5	AGO10	Stabilizer of iron transporter SufD / Polynucleotidyl transferase
ath-u.5	AGO1	Stabilizer of iron transporter SufD / Polynucleotidyl transferase
bra-r.6	103829691	protein argonaute 5
bra-r.6	103833004	protein argonaute 1
bra-r.6	103868679	protein argonaute 1
vvi-u.5	100258447	protein argonaute 5
vvi-u.5	100268067	protein argonaute PNH1
vvi-u.5	100256320	protein argonaute 1
ghi-r.1	121224458	protein argonaute 1
ghi-r.1	121220847	protein argonaute 5
ghi-r.1	107952160	protein argonaute 10
bna-r.1	106427533	protein argonaute 10
bna-r.1	106423767	protein argonaute 1
bna-r.1	106396342	protein argonaute 5
cit-r.1	102628378	protein argonaute 10
cit-r.1	102630678	protein argonaute 5-like
sly-u.5	AGO10	protein argonaute 10
sly-u.5	101259671	protein argonaute 10
sly-u.5	AGO1B	Argonaute1B
sot-r.1	102582607	protein argonaute 1-like
sot-r.1	102594078	protein argonaute 10-like
sot-r.1	102594657	protein argonaute 5-like
nta-r.1	107829827	protein argonaute PNH1-like
nta-r.1	107771391	protein argonaute 1
nta-r.1	107782898	protein argonaute 10
osa-u.5	9269490	protein argonaute PNH1-like
osa-u.5	4333733	protein argonaute 11-like
zma-u.5	103626484	protein argonaute 1D
zma-u.5	100193970	uncharacterized LOC100193970
zma-u.5	100304327	argonaute1c
tae-r.2	123046293	protein argonaute 1B
hvu-r.1	123427487	protein argonaute 1B
sbi-r.1	8056608	protein argonaute 1B
bdi-r.1	100830516	protein argonaute 1A
bdi-r.1	100829954	protein argonaute MEL1
cre-r.1	CHLRE_16g689647v5	uncharacterized protein

Top 50 coexpressed genes to 25482951 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25482951 (mtr-u.5 coexpression data)

CoexMap"25482951"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1400 genes)	IEA
GO:0005515 [list] [network] protein binding	(5045 genes)	IEA

Protein

XP_013467018.2 [sequence] [blastp]
XP_039690412.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 4	(predict for XP_013467018.2)
nucl 6, cyto 4	(predict for XP_039690412.1)

Subcellular
localization
TargetP

chlo 4, other 3	(predict for XP_013467018.2)
chlo 4, other 3	(predict for XP_039690412.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25482951	mtr-r.5 for 25482951	mtr-u.5 for 11409042	mtr-u.5 for 25485122	gma-u.5 for 100819073	gma-u.5 for 100816999	gma-u.5 for 100813485	ppo-u.5 for 18105620	ppo-u.5 for 7454033	ppo-u.5 for 7463340	ath-u.5 for AGO5	ath-u.5 for AGO10	ath-u.5 for AGO1	bra-r.6 for 103829691	bra-r.6 for 103833004	bra-r.6 for 103868679	vvi-u.5 for 100258447	vvi-u.5 for 100268067	vvi-u.5 for 100256320	ghi-r.1 for 121224458	ghi-r.1 for 121220847	ghi-r.1 for 107952160	bna-r.1 for 106427533	bna-r.1 for 106423767	bna-r.1 for 106396342	cit-r.1 for 102628378	cit-r.1 for 102630678	sly-u.5 for AGO10	sly-u.5 for 101259671	sly-u.5 for AGO1B	sot-r.1 for 102582607	sot-r.1 for 102594078	sot-r.1 for 102594657	nta-r.1 for 107829827	nta-r.1 for 107771391	nta-r.1 for 107782898	osa-u.5 for 9269490	osa-u.5 for 4333733	zma-u.5 for 103626484	zma-u.5 for 100193970	zma-u.5 for 100304327	tae-r.2 for 123046293	hvu-r.1 for 123427487	sbi-r.1 for 8056608	bdi-r.1 for 100830516	bdi-r.1 for 100829954	cre-r.1 for CHLRE_16g689647v5

Ortholog

Ortholog ID: 261

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

AGO5

AGO5

AGO10

AGO1

AGO5

Function^*

protein argonaute 10

protein argonaute 5

protein argonaute 1

protein argonaute PNH1

argonaute 5

argonaute 1

protein argonaute 1-like

protein argonaute 1

protein argonaute 10

Argonaute family protein

Stabilizer of iron transporter SufD / Polynucleotidyl transferase

protein argonaute 5

protein argonaute 1

protein argonaute PNH1

protein argonaute 1

protein argonaute 10

protein argonaute 1

protein argonaute 10

protein argonaute 1

protein argonaute 5-like

protein argonaute 1

protein argonaute MEL1-like

protein argonaute 10

protein argonaute 1A-like

Argonaute 5

protein argonaute 1-like

protein argonaute 10-like

protein argonaute 1

protein argonaute PNH1-like

protein argonaute 10

protein argonaute 1

protein argonaute 1A-like

protein argonaute 13-like

uncharacterized LOC100384259

uncharacterized LOC100384364

protein argonaute MEL1

protein argonaute 1D

protein argonaute PNH1

protein argonaute 1B

protein argonaute 1A

protein argonaute MEL1

protein argonaute 1B

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03013	Nucleocytoplasmic transport	3
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	3
sbi04120	Ubiquitin mediated proteolysis	3
sbi03015	mRNA surveillance pathway	2
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3
sbi03015	mRNA surveillance pathway	3
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

25485122

25492353

25497351

100808457

100799033

100778754

18105620

7454033

7498053

817334

834403

841262

103829691

103833004

103868679

100268067

100256320

100244311

121224458

107952160

107929142

106427533

111215636

106352557

102630678

102616587

102630160

101259671

101247032

101244672

102582607

102594078

102595869

107829827

107801972

107806342

4330281

4334374

100384259

100384364

103625809

123113746

123149841

123413304

8056608

8065288

100830516

100829954

100826932

5724406

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	2	3	3	3	2	3	1	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25482951 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25482951 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**