ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25483290	uncharacterized LOC25483290
mtr-r.5	25483290	uncharacterized LOC25483290
gma-u.5	100779869	uncharacterized LOC100779869
ppo-u.5	7479640	uncharacterized LOC7479640
ath-u.5	AT2G41020	WW domain-containing protein
vvi-u.5	100263596	uncharacterized LOC100263596
sly-u.5	101257622	uncharacterized LOC101257622
osa-u.5	4324332	uncharacterized LOC4324332
zma-u.5	100280668	protein binding protein

functional annotation

KEGG

mtr03040 [list] [network] Spliceosome (435 genes)

GO BP

GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome

(4 genes)

IEA

GO CC

GO:0016604 [list] [network] nuclear body	(10 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4514 genes)	IEA

GO MF

GO:0043021 [list] [network] ribonucleoprotein complex binding	(78 genes)	IEA
GO:0005515 [list] [network] protein binding	(5045 genes)	IEA

Protein

XP_013467418.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_013467418.1)

Subcellular
localization
TargetP

other 7

(predict for XP_013467418.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25483290	mtr-r.5 for 25483290	gma-u.5 for 100779869	ppo-u.5 for 7479640	ath-u.5 for AT2G41020	vvi-u.5 for 100263596	sly-u.5 for 101257622	osa-u.5 for 4324332	zma-u.5 for 100280668

Ortholog ID: 10039

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC25483290

uncharacterized LOC100779869

uncharacterized LOC7479640

WW domain-containing protein

polyglutamine-binding protein 1

uncharacterized LOC100263596

WW domain-binding protein 4

uncharacterized LOC107925934

polyglutamine-binding protein 1

uncharacterized LOC102616211

uncharacterized LOC101257622

uncharacterized LOC102606319

uncharacterized LOC107821129

uncharacterized LOC107760870

uncharacterized LOC4324332

protein binding protein

uncharacterized LOC123063058

uncharacterized LOC123080258

uncharacterized LOC123445200

E3 ubiquitin-protein ligase Smurf1

uncharacterized LOC100840198

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	3
mtr00240	Pyrimidine metabolism	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna03040	Spliceosome	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta03050	Proteasome	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	10
tae03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

25483290

100779869

7479640

818702

103865858

100263596

121209481

107925934

106391634

106431122

102616211

101257622

102606319

107821129

107760870

4324332

100280668

123063058

123080258

123445200

8059354

100840198

5722461

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25483290 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25483290 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25483290 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25483290 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**