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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25483958   protein PTST homolog 3, chloroplastic 
 mtr-r.5   25483958   protein PTST homolog 3, chloroplastic 
 gma-u.5   102665387   protein PTST homolog 3, chloroplastic 
 gma-u.5   100805984   protein PTST homolog 3, chloroplastic 
 ppo-u.5   18100145   protein PTST homolog 3, chloroplastic 
 ath-u.5   AT5G03420   5'-AMP-activated protein kinase-like protein 
 vvi-u.5   100250241   protein PTST homolog 3, chloroplastic 
 sly-u.5   101260965   protein PTST homolog 3, chloroplastic 

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Top 50 coexpressed genes to 25483958 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25483958 (mtr-u.5 coexpression data)

CoexMap"25483958"


mtrLOC25483958 | Entrez gene ID : 25483958      
Species mtr gma ppo ath vvi sly tae osa hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013468137.1 [sequence] [blastp]
XP_024634044.1 [sequence] [blastp]
XP_024634047.1 [sequence] [blastp]
XP_039683430.1 [sequence] [blastp]
XP_039683431.1 [sequence] [blastp]
XP_039683434.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_013468137.1)
chlo 6,  chlo_mito 4,  mito 1  (predict for XP_024634044.1)
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_024634047.1)
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_039683430.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_039683431.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_039683434.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_013468137.1)
chlo 3  (predict for XP_024634044.1)
chlo 3  (predict for XP_024634047.1)
chlo 3  (predict for XP_039683430.1)
chlo 3  (predict for XP_039683431.1)
chlo 3  (predict for XP_039683434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25483958

.
mtr-r.5
for
25483958

.
gma-u.5
for
102665387

.
gma-u.5
for
100805984

.
ppo-u.5
for
18100145

.
ath-u.5
for
AT5G03420

.
vvi-u.5
for
100250241

.
sly-u.5
for
101260965

.


Ortholog ID: 13198
Species ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT5G03420 LOC100805984 LOC102665387 LOC101260965 LOC103847382 LOC100250241 LOC18100145 LOC25483958 LOC107905319 LOC107886804 LOC106403588 LOC106372637 LOC102606111 LOC102606921 LOC107786631 LOC107810014
Function* 5'-AMP-activated protein kinase-like protein protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic uncharacterized LOC102606111 protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic protein PTST homolog 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00904 Diterpenoid biosynthesis 2
gma00061 Fatty acid biosynthesis 2
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 5
sly00860 Porphyrin metabolism 4
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03060 Protein export 3
nta00230 Purine metabolism 2
nta00740 Riboflavin metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831846 100805984 102665387 101260965 103847382 100250241 18100145 25483958 107905319 107886804 106403588 106372637 102606111 102606921 107786631 107810014
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