ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25485793	aspartic proteinase
mtr-r.5	25485793	aspartic proteinase
mtr-u.5	25494147	cyprosin
mtr-u.5	25486204	aspartic proteinase
mtr-u.5	11432055	aspartic proteinase
gma-u.5	100801598	aspartic proteinase A1
gma-u.5	100796053	cyprosin
gma-u.5	100793160	cyprosin
ppo-u.5	7478710	aspartic proteinase A1
ppo-u.5	7477206	aspartic proteinase
ppo-u.5	7458299	cyprosin
ath-u.5	APA1	aspartic proteinase A1
ath-u.5	AT4G04460	Saposin-like aspartyl protease family protein
ath-u.5	AT1G62290	Saposin-like aspartyl protease family protein
vvi-u.5	100233021	aspartic proteinase A1
vvi-u.5	100251117	aspartic proteinase
vvi-u.5	100261280	cyprosin
sly-u.5	101248260	aspartic proteinase
sly-u.5	101257143	aspartic proteinase A1
sly-u.5	101258304	cyprosin
osa-u.5	4337744	aspartic proteinase-like
osa-u.5	4339639	aspartic proteinase oryzasin-1-like
osa-u.5	4325154	aspartic proteinase-like
zma-u.5	100383486	uncharacterized LOC100383486
zma-u.5	100286141	retrotransposon protein SINE subclass
zma-u.5	100284362	aspartic proteinase oryzasin-1

Top 50 coexpressed genes to 25485793 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25485793 (mtr-u.5 coexpression data)

CoexMap"25485793"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006629 [list] [network] lipid metabolic process	(866 genes)	IEA
GO:0006508 [list] [network] proteolysis	(1005 genes)	IEA

GO CC

GO MF

GO:0004190 [list] [network] aspartic-type endopeptidase activity

(144 genes)

IEA

Protein

XP_024638887.1 [sequence] [blastp]
XP_024638888.1 [sequence] [blastp]
XP_039685628.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_024638887.1)
chlo 9	(predict for XP_024638888.1)
chlo 9	(predict for XP_039685628.1)

Subcellular
localization
TargetP

scret 7, mito 3	(predict for XP_024638887.1)
scret 7, mito 3	(predict for XP_024638888.1)
scret 7, mito 3	(predict for XP_039685628.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25485793	mtr-r.5 for 25485793	mtr-u.5 for 25494147	mtr-u.5 for 25486204	mtr-u.5 for 11432055	gma-u.5 for 100801598	gma-u.5 for 100796053	gma-u.5 for 100793160	ppo-u.5 for 7478710	ppo-u.5 for 7477206	ppo-u.5 for 7458299	ath-u.5 for APA1	ath-u.5 for AT4G04460	ath-u.5 for AT1G62290	vvi-u.5 for 100233021	vvi-u.5 for 100251117	vvi-u.5 for 100261280	sly-u.5 for 101248260	sly-u.5 for 101257143	sly-u.5 for 101258304	osa-u.5 for 4337744	osa-u.5 for 4339639	osa-u.5 for 4325154	zma-u.5 for 100383486	zma-u.5 for 100286141	zma-u.5 for 100284362

Ortholog

Ortholog ID: 572

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

APA1

Function^*

aspartic proteinase

cyprosin

aspartic proteinase A1

aspartic proteinase

aspartic proteinase-like

Saposin-like aspartyl protease family protein

aspartic proteinase A1

aspartic proteinase A3

aspartic proteinase A1

cyprosin

aspartic proteinase A1

aspartic proteinase A3

aspartic proteinase A1-like

aspartic proteinase-like

aspartic proteinase A1

aspartic proteinase

aspartic proteinase-like

aspartic proteinase A1-like

aspartic proteinase A1

cyprosin

aspartic proteinase-like

aspartic proteinase oryzasin-1

Aspartic proteinase A1

phytepsin

aspartic proteinase oryzasin-1

phytepsin

aspartic proteinase

aspartic proteinase-like

aspartic proteinase oryzasin-1

aspartic proteinase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr00410	beta-Alanine metabolism	2
mtr00770	Pantothenate and CoA biosynthesis	2
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma00900	Terpenoid backbone biosynthesis	2
gma00999	Biosynthesis of various plant secondary metabolites	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	3
ath04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	4
bra04626	Plant-pathogen interaction	3
bra04075	Plant hormone signal transduction	2
bra00240	Pyrimidine metabolism	2
bra00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00410	beta-Alanine metabolism	4
ghi00561	Glycerolipid metabolism	4
ghi00770	Pantothenate and CoA biosynthesis	4
ghi00330	Arginine and proline metabolism	3
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00410	beta-Alanine metabolism	6
ghi00561	Glycerolipid metabolism	4
ghi00770	Pantothenate and CoA biosynthesis	4
ghi00330	Arginine and proline metabolism	3
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	3
bna00020	Citrate cycle (TCA cycle)	3
bna00620	Pyruvate metabolism	3
bna00710	Carbon fixation by Calvin cycle	3
bna01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	3
nta04626	Plant-pathogen interaction	3
nta00860	Porphyrin metabolism	2
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	4
osa00730	Thiamine metabolism	2
osa04142	Lysosome	2
osa00561	Glycerolipid metabolism	2
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	4
osa04626	Plant-pathogen interaction	2
osa00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	6
tae00260	Glycine, serine and threonine metabolism	5
tae00280	Valine, leucine and isoleucine degradation	5
tae00330	Arginine and proline metabolism	5
tae00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00240	Pyrimidine metabolism	2
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2
hvu03013	Nucleocytoplasmic transport	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04142	Lysosome	3

Expression

Expression pattern

Entrez Gene ID^*

11427124

11432055

100782139

100801598

7478872

7479135

842526

837740

103836199

103839838

100233021

100261280

107926283

107920178

106376996

106362176

102625358

102628488

101248260

101258506

102606096

102587740

107808002

107800406

4325154

4337744

100282399

100280169

123146520

123061554

123450729

123423347

110430277

8058198

100839510

100842338

5717915

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25485793 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25485793 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**