ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25487687	zinc finger CCCH domain-containing protein 61
mtr-r.5	25487687	zinc finger CCCH domain-containing protein 61
gma-u.5	100820375	zinc finger CCCH domain-containing protein 2
gma-u.5	100800123	zinc finger CCCH domain-containing protein 2
ppo-u.5	7459958	zinc finger CCCH domain-containing protein 2
ppo-u.5	18106783	zinc finger CCCH domain-containing protein 2
ath-u.5	AT5G44260	Zinc finger C-x8-C-x5-C-x3-H type family protein
ath-u.5	SOM	Zinc finger C-x8-C-x5-C-x3-H type family protein
vvi-u.5	100257395	zinc finger CCCH domain-containing protein 2
sly-u.5	101249100	zinc finger CCCH domain-containing protein 2

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(2334 genes)

IEA

Protein

XP_013465134.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_013465134.1)

Subcellular
localization
TargetP

chlo 4, other 3, mito 3

(predict for XP_013465134.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25487687	mtr-r.5 for 25487687	gma-u.5 for 100820375	gma-u.5 for 100800123	ppo-u.5 for 7459958	ppo-u.5 for 18106783	ath-u.5 for AT5G44260	ath-u.5 for SOM	vvi-u.5 for 100257395	sly-u.5 for 101249100

Ortholog ID: 8181

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

nta

Symbol

SOM

Function^*

zinc finger CCCH domain-containing protein 61

zinc finger CCCH domain-containing protein 2

Zinc finger C-x8-C-x5-C-x3-H type family protein

zinc finger CCCH domain-containing protein 61

zinc finger CCCH domain-containing protein 2

zinc finger CCCH domain-containing protein 2-like

zinc finger CCCH domain-containing protein 61

zinc finger CCCH domain-containing protein 2

zinc finger CCCH domain-containing protein 61-like

zinc finger CCCH domain-containing protein 61

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3
vvi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01040	Biosynthesis of unsaturated fatty acids	2
ghi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	4
nta04075	Plant hormone signal transduction	2
nta00904	Diterpenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

25487687

100800123

7459958

18106783

834449

839408

103827917

100257395

107960118

107960119

111197736

106409017

102618966

101249100

107809749

107778043

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25487687 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25487687 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	2	2	2	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25487687 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25487687 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**