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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25489244   TATA-box-binding protein 
 mtr-r.5   25489244   TATA-box-binding protein 
 mtr-u.5   25489234   TATA-box-binding protein 
 mtr-u.5   25498820   TATA-box-binding protein 
 mtr-u.5   25491712   TATA-box-binding protein 
 gma-u.5   100810845   TATA-box-binding protein 
 gma-u.5   100790566   TATA-box-binding protein 
 gma-u.5   100804848   TATA-box-binding protein 
 ppo-u.5   7453590   uncharacterized LOC7453590 
 ath-u.5   TBP2   TATA binding protein 2 
 ath-u.5   TBP1   TATA binding protein 1 
 vvi-u.5   100243302   TATA-box-binding protein 
 sly-u.5   101254627   TATA-box-binding protein 
 osa-u.5   4333619   TATA-binding protein 2-like 
 osa-u.5   4348699   TATA-binding protein 2-like 
 osa-u.5   4352633   TATA-binding protein 2-like 
 zma-u.5   542241   TATA-binding protein 2 

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Top 50 coexpressed genes to 25489244 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25489244 (mtr-u.5 coexpression data)

CoexMap"25489244"


mtrLOC25489244 | Entrez gene ID : 25489244      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 1 2 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03022 [list] [network] Basal transcription factors (52 genes)
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (78 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013460595.1 [sequence] [blastp]
XP_013460600.1 [sequence] [blastp]
XP_024635490.1 [sequence] [blastp]
XP_024635492.1 [sequence] [blastp]
XP_024635493.1 [sequence] [blastp]
XP_024635494.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_013460595.1)
chlo 8,  mito 1  (predict for XP_013460600.1)
chlo 7,  mito 3  (predict for XP_024635490.1)
chlo 7,  mito 3  (predict for XP_024635492.1)
chlo 7,  mito 3  (predict for XP_024635493.1)
chlo 7,  mito 3  (predict for XP_024635494.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for XP_013460595.1)
chlo 7,  mito 4  (predict for XP_013460600.1)
chlo 6,  mito 5  (predict for XP_024635490.1)
chlo 6,  mito 5  (predict for XP_024635492.1)
chlo 6,  mito 5  (predict for XP_024635493.1)
chlo 6,  mito 5  (predict for XP_024635494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25489244

.
mtr-r.5
for
25489244

.
mtr-u.5
for
25489234

.
mtr-u.5
for
25498820

.
mtr-u.5
for
25491712

.
gma-u.5
for
100810845

.
gma-u.5
for
100790566

.
gma-u.5
for
100804848

.
ppo-u.5
for
7453590

.
ath-u.5
for
TBP2

.
ath-u.5
for
TBP1

.
vvi-u.5
for
100243302

.
sly-u.5
for
101254627

.
osa-u.5
for
4333619

.
osa-u.5
for
4348699

.
osa-u.5
for
4352633

.
zma-u.5
for
542241

.


Ortholog ID: 1741
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol TBP2 TBP1 LOC100790566 LOC100810845 LOC101254627 LOC4348699 LOC4333619 LOC542240 LOC542241 LOC103832582 LOC103829778 LOC100243302 LOC7453590 LOC25491712 LOC25489234 LOC123110157 LOC123095622 LOC123452199 LOC123429269 LOC107899139 LOC107893254 LOC125577229 LOC106360359 CHLRE_12g505700v5 LOC8086107 LOC102596656 LOC102583666 LOC102614840 LOC100836217 LOC100837002 LOC107789091 LOC142176366
Function* TATA binding protein 2 TATA binding protein 1 TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein TATA-binding protein 2-like TATA-binding protein 2-like TATA-binding protein 1 TATA-binding protein 2 TATA-box-binding protein 2 TATA-box-binding protein 2 TATA-box-binding protein uncharacterized LOC7453590 TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein 2 TATA-box-binding protein 2 TATA-box-binding protein 2-like TATA-box-binding protein 1 TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein 2-like TATA-box-binding protein 2 uncharacterized protein TATA-box-binding protein 2 TATA-box-binding protein-like TATA-box-binding protein-like TATA-box-binding protein 2 TATA-binding protein 2 TATA-binding protein 2 TATA-box-binding protein TATA-box-binding protein-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 5
gma03040 Spliceosome 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma04144 Endocytosis 2
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma04712 Circadian rhythm - plant 3
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
tae03022 Basal transcription factors 3
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
sbi03022 Basal transcription factors 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03022 Basal transcription factors 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta03022 Basal transcription factors 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
nta03040 Spliceosome 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841999 820546 100790566 100810845 101254627 4348699 4333619 542240 542241 103832582 103829778 100243302 7453590 25491712 25489234 123110157 123095622 123452199 123429269 107899139 107893254 125577229 106360359 5716470 8086107 102596656 102583666 102614840 100836217 100837002 107789091 142176366
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