ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25490144	protein cereblon
mtr-r.5	25490144	protein cereblon
mtr-u.5	11420844	protein cereblon
gma-u.5	100779918	uncharacterized LOC100779918
gma-u.5	100779778	protein cereblon
ppo-u.5	7462291	uncharacterized LOC7462291
ppo-u.5	7463779	uncharacterized LOC7463779
ath-u.5	AT2G25740	ATP-dependent protease La (LON) domain protein
bra-r.6	103842170	uncharacterized LOC103842170
bra-r.6	103858369	uncharacterized LOC103858369
vvi-u.5	100268165	uncharacterized LOC100268165
ghi-r.1	107953853	uncharacterized LOC107953853
ghi-r.1	107929951	uncharacterized LOC107929951
bna-r.1	106438389	uncharacterized LOC106438389
bna-r.1	106402136	uncharacterized LOC106402136
bna-r.1	106368551	protein cereblon
cit-r.1	102625906	uncharacterized LOC102625906
sly-u.5	101244653	ATP-dependent protease La (LON) domain protein
sot-r.1	102599009	uncharacterized LOC102599009
nta-r.1	107779828	uncharacterized LOC107779828
nta-r.1	107775101	uncharacterized LOC107775101
osa-u.5	4326165	uncharacterized LOC4326165
osa-u.5	4339355	uncharacterized LOC4339355
zma-u.5	103651221	uncharacterized LOC103651221
zma-u.5	100193513	ATP-dependent protease La (LON) domain protein
tae-r.2	123063546	protein cereblon
tae-r.2	123079049	uncharacterized LOC123079049
tae-r.2	123140682	protein cereblon
hvu-r.1	123446851	protein cereblon-like
hvu-r.1	123444383	uncharacterized LOC123444383
sbi-r.1	8068946	protein cereblon
sbi-r.1	8062173	protein cereblon homolog
bdi-r.1	100828195	protein cereblon
bdi-r.1	100824897	protein cereblon
cre-r.1	CHLRE_13g585651v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(329 genes)

IEA

GO CC

GO:0031464 [list] [network] Cul4A-RING E3 ubiquitin ligase complex

(12 genes)

IEA

GO MF

Protein

XP_013462051.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, cysk 1, cysk_plas 1, chlo 1, vacu 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_013462051.1)

Subcellular
localization
TargetP

other 9

(predict for XP_013462051.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25490144	mtr-r.5 for 25490144	mtr-u.5 for 11420844	gma-u.5 for 100779918	gma-u.5 for 100779778	ppo-u.5 for 7462291	ppo-u.5 for 7463779	ath-u.5 for AT2G25740	bra-r.6 for 103842170	bra-r.6 for 103858369	vvi-u.5 for 100268165	ghi-r.1 for 107953853	ghi-r.1 for 107929951	bna-r.1 for 106438389	bna-r.1 for 106402136	bna-r.1 for 106368551	cit-r.1 for 102625906	sly-u.5 for 101244653	sot-r.1 for 102599009	nta-r.1 for 107779828	nta-r.1 for 107775101	osa-u.5 for 4326165	osa-u.5 for 4339355	zma-u.5 for 103651221	zma-u.5 for 100193513	tae-r.2 for 123063546	tae-r.2 for 123079049	tae-r.2 for 123140682	hvu-r.1 for 123446851	hvu-r.1 for 123444383	sbi-r.1 for 8068946	sbi-r.1 for 8062173	bdi-r.1 for 100828195	bdi-r.1 for 100824897	cre-r.1 for CHLRE_13g585651v5

Ortholog

Ortholog ID: 5474

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein cereblon

uncharacterized LOC100779918

protein cereblon

uncharacterized LOC7462291

uncharacterized LOC7463779

ATP-dependent protease La (LON) domain protein

uncharacterized LOC103842170

uncharacterized LOC103858369

uncharacterized LOC100268165

uncharacterized LOC107953853

uncharacterized LOC107929951

uncharacterized LOC106438389

uncharacterized LOC106402136

protein cereblon

uncharacterized LOC102625906

ATP-dependent protease La (LON) domain protein

uncharacterized LOC102599009

uncharacterized LOC107779828

uncharacterized LOC107775101

uncharacterized LOC4326165

uncharacterized LOC4339355

uncharacterized LOC103651221

ATP-dependent protease La (LON) domain protein

uncharacterized LOC123079049

protein cereblon

protein cereblon-like

uncharacterized LOC123444383

protein cereblon

protein cereblon homolog

protein cereblon

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	2
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	2
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2
zma04141	Protein processing in endoplasmic reticulum	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00790	Folate biosynthesis	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00100	Steroid biosynthesis	2
sbi04075	Plant hormone signal transduction	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

25490144

11420844

100779918

100779778

7462291

7463779

817117

103842170

103858369

100268165

107953853

107929951

106438389

106402136

106368551

102625906

101244653

102599009

107779828

107775101

4326165

4339355

103651221

100193513

123079049

123140682

123182671

123446851

123444383

8068946

8062173

100828195

100824897

66056040

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25490144 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25490144 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	1	2	1	2	3	1	1	1	2	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25490144 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25490144 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**