ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25490441	beta-amyrin synthase
mtr-r.5	25490441	beta-amyrin synthase
mtr-u.5	11427580	cycloartenol synthase-like
mtr-u.5	11428611	mixed-amyrin synthase
mtr-u.5	25491157	beta-amyrin synthase
gma-u.5	100810544	beta-amyrin synthase
gma-u.5	100810400	lupeol synthase
gma-u.5	100809670	beta-amyrin synthase
ppo-u.5	18094524	lupeol synthase
ath-u.5	LUP1	lupeol synthase 1
ath-u.5	LUP2	lupeol synthase 2
ath-u.5	CAMS1	camelliol C synthase 1
bra-r.6	103828738	cycloartenol synthase
bra-r.6	103830506	amyrin synthase LUP2
bra-r.6	103832374	amyrin synthase LUP2
vvi-u.5	100261496	beta-amyrin synthase 1-like
vvi-u.5	100241546	lupeol synthase
vvi-u.5	100243389	cycloartenol Synthase
ghi-r.1	107901998	lupeol synthase
ghi-r.1	107906373	beta-amyrin synthase
ghi-r.1	107913787	beta-amyrin synthase
bna-r.1	106389426	cycloartenol synthase
bna-r.1	125608837	seco-amyrin synthase-like
bna-r.1	111213217	cycloartenol synthase-like
cit-r.1	102609708	beta-amyrin synthase 1-like
cit-r.1	102618743	beta-amyrin synthase-like
cit-r.1	102624399	cycloartenol synthase-like
sly-u.5	lTTS1	beta-amyrin synthase
sly-u.5	TTS2	delta-amyrin synthase
sly-u.5	CAS1	cycloartenol synthase
sot-r.1	102594718	cycloartenol synthase 2-like
sot-r.1	102600122	beta-amyrin synthase-like
sot-r.1	102593690	beta-amyrin synthase-like
nta-r.1	107762202	beta-amyrin synthase
nta-r.1	107762593	cycloartenol Synthase-like
nta-r.1	107762781	beta-amyrin synthase
osa-u.5	9268610	parkeol synthase-like
osa-u.5	4350295	achilleol B synthase-like
zma-u.5	100382426	Cycloartenol synthase
zma-u.5	100382158	uncharacterized LOC100382158
zma-u.5	103654926	cycloartenol synthase
tae-r.2	123132191	achilleol B synthase
tae-r.2	123119046	cycloartenol synthase
hvu-r.1	123410304	achilleol B synthase-like
sbi-r.1	8067848	achilleol B synthase
bdi-r.1	100843581	cycloartenol synthase
bdi-r.1	100844079	cycloartenol synthase
cre-r.1	CHLRE_01g011100v5	uncharacterized protein

Top 50 coexpressed genes to 25490441 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25490441 (mtr-u.5 coexpression data)

CoexMap"25490441"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (38 genes)

mtr00999 [list] [network] Biosynthesis of various plant secondary metabolites (78 genes)

GO BP

GO:0016104 [list] [network] triterpenoid biosynthetic process

(15 genes)

IEA

GO CC

GO:0005811 [list] [network] lipid droplet

(25 genes)

IEA

GO MF

GO:0042300 [list] [network] beta-amyrin synthase activity

(8 genes)

IEA

Protein

XP_024634122.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 3, chlo 1, mito 1, vacu 1, chlo_mito 1

(predict for XP_024634122.1)

Subcellular
localization
TargetP

other 8

(predict for XP_024634122.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25490441	mtr-r.5 for 25490441	mtr-u.5 for 11427580	mtr-u.5 for 11428611	mtr-u.5 for 25491157	gma-u.5 for 100810544	gma-u.5 for 100810400	gma-u.5 for 100809670	ppo-u.5 for 18094524	ath-u.5 for LUP1	ath-u.5 for LUP2	ath-u.5 for CAMS1	bra-r.6 for 103828738	bra-r.6 for 103830506	bra-r.6 for 103832374	vvi-u.5 for 100261496	vvi-u.5 for 100241546	vvi-u.5 for 100243389	ghi-r.1 for 107901998	ghi-r.1 for 107906373	ghi-r.1 for 107913787	bna-r.1 for 106389426	bna-r.1 for 125608837	bna-r.1 for 111213217	cit-r.1 for 102609708	cit-r.1 for 102618743	cit-r.1 for 102624399	sly-u.5 for lTTS1	sly-u.5 for TTS2	sly-u.5 for CAS1	sot-r.1 for 102594718	sot-r.1 for 102600122	sot-r.1 for 102593690	nta-r.1 for 107762202	nta-r.1 for 107762593	nta-r.1 for 107762781	osa-u.5 for 9268610	osa-u.5 for 4350295	zma-u.5 for 100382426	zma-u.5 for 100382158	zma-u.5 for 103654926	tae-r.2 for 123132191	tae-r.2 for 123119046	hvu-r.1 for 123410304	sbi-r.1 for 8067848	bdi-r.1 for 100843581	bdi-r.1 for 100844079	cre-r.1 for CHLRE_01g011100v5

Ortholog

Ortholog ID: 225

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LUP5

LAS1

CAS1

CAS1

LAS

OSC1

Function^*

beta-amyrin synthase

mixed-amyrin synthase

beta-amyrin synthase

lupeol synthase

cycloartenol synthase

beta-amyrin synthase

cycloartenol synthase

Terpenoid cyclases family protein

lanosterol synthase 1

cycloartenol synthase 1

cycloartenol synthase

amyrin synthase LUP2

beta-amyrin synthase 1

beta-amyrin synthase

beta-amyrin synthase 1

lupeol synthase

cycloartenol synthase 2

lupeol synthase

cycloartenol synthase

beta-amyrin synthase 1

beta-amyrin synthase 1-like

cycloartenol synthase 2

cycloartenol synthase-like

cycloartenol synthase

lanosterol synthase-like

oxidosqualene cyclase 1

beta-amyrin synthase

cycloartenol Synthase-like

beta-amyrin synthase

cycloartenol Synthase-like

cycloartenol Synthase

achilleol B synthase-like

cycloartenol synthase-like

cycloartenol synthase

uncharacterized LOC100193317

cycloartenol synthase

achilleol B synthase-like

cycloartenol synthase

achilleol B synthase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	5
mtr00999	Biosynthesis of various plant secondary metabolites	5
mtr00280	Valine, leucine and isoleucine degradation	2
mtr00650	Butanoate metabolism	2
mtr00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	8
mtr00999	Biosynthesis of various plant secondary metabolites	5
mtr00100	Steroid biosynthesis	3
mtr00280	Valine, leucine and isoleucine degradation	2
mtr00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	4
gma00999	Biosynthesis of various plant secondary metabolites	3
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04626	Plant-pathogen interaction	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	7
ath01200	Carbon metabolism	7
ath00010	Glycolysis / Gluconeogenesis	5
ath00020	Citrate cycle (TCA cycle)	4
ath00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	4
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00900	Terpenoid backbone biosynthesis	2
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	4
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04081	Hormone signaling	4
ghi00062	Fatty acid elongation	2
ghi04626	Plant-pathogen interaction	2
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00100	Steroid biosynthesis	6
ghi00061	Fatty acid biosynthesis	2
ghi00780	Biotin metabolism	2
ghi01212	Fatty acid metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04081	Hormone signaling	4
ghi00062	Fatty acid elongation	2
ghi04626	Plant-pathogen interaction	2
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00100	Steroid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6
bna04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2
cit00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	8
sly00280	Valine, leucine and isoleucine degradation	2
sly00620	Pyruvate metabolism	2
sly00650	Butanoate metabolism	2
sly00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00909	Sesquiterpenoid and triterpenoid biosynthesis	4
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00061	Fatty acid biosynthesis	3
sot00620	Pyruvate metabolism	3
sot01200	Carbon metabolism	3
sot01212	Fatty acid metabolism	3
sot00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	4
nta00999	Biosynthesis of various plant secondary metabolites	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	6
nta00190	Oxidative phosphorylation	5
nta04145	Phagosome	5
nta01230	Biosynthesis of amino acids	3
nta00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00100	Steroid biosynthesis	4
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma02010	ABC transporters	2
zma04981	Folate transport and metabolism	2
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00330	Arginine and proline metabolism	3
tae00620	Pyruvate metabolism	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	3
sbi04146	Peroxisome	3
sbi03013	Nucleocytoplasmic transport	2
sbi00062	Fatty acid elongation	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00100	Steroid biosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

25490441

11428611

100810544

100794151

100784662

7465577

7485522

843014

823649

815275

103828738

103832374

100249623

100259856

100254746

107901998

107926281

107962932

106439781

106353429

102609708

102616606

102615312

100147715

101261713

101265842

102592553

102581012

107762202

107806219

107826198

4350734

4328256

103654926

100193317

123132185

123411732

123406116

8067848

8072983

8073228

100827654

5715025

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	1	3	3	3	3	3	3	3	3	3	2	3	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25490441 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25490441 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**