ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25491811	uncharacterized LOC25491811
mtr-r.5	25491811	uncharacterized LOC25491811
gma-u.5	100785744	uncharacterized LOC100785744
gma-u.5	100306460	uncharacterized LOC100306460
ppo-u.5	7494316	uncharacterized LOC7494316
ath-u.5	AT2G44870	replicase polyprotein 1ab protein
bra-r.6	103852218	uncharacterized LOC103852218
vvi-u.5	100247606	uncharacterized LOC100247606
ghi-r.1	107959426	uncharacterized LOC107959426
ghi-r.1	107909072	uncharacterized LOC107909072
ghi-r.1	107928397	uncharacterized LOC107928397
bna-r.1	106406315	uncharacterized LOC106406315
bna-r.1	106408180	uncharacterized LOC106408180
cit-r.1	102624952	uncharacterized LOC102624952
sly-u.5	101266837	uncharacterized LOC101266837
sot-r.1	102589298	uncharacterized LOC102589298
nta-r.1	107829787	uncharacterized LOC107829787
osa-u.5	4349444	uncharacterized LOC4349444
zma-u.5	100194183	uncharacterized LOC100194183
tae-r.2	123127976	uncharacterized LOC123127976
tae-r.2	123051933	uncharacterized LOC123051933
tae-r.2	123181631	uncharacterized LOC123181631
hvu-r.1	123438783	uncharacterized LOC123438783
sbi-r.1	8055160	uncharacterized LOC8055160
bdi-r.1	100831966	uncharacterized LOC100831966
cre-r.1	CHLRE_12g551100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(642 genes)

IEA

GO MF

Protein

XP_013455294.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_013455294.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_013455294.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25491811	mtr-r.5 for 25491811	gma-u.5 for 100785744	gma-u.5 for 100306460	ppo-u.5 for 7494316	ath-u.5 for AT2G44870	bra-r.6 for 103852218	vvi-u.5 for 100247606	ghi-r.1 for 107959426	ghi-r.1 for 107909072	ghi-r.1 for 107928397	bna-r.1 for 106406315	bna-r.1 for 106408180	cit-r.1 for 102624952	sly-u.5 for 101266837	sot-r.1 for 102589298	nta-r.1 for 107829787	osa-u.5 for 4349444	zma-u.5 for 100194183	tae-r.2 for 123127976	tae-r.2 for 123051933	tae-r.2 for 123181631	hvu-r.1 for 123438783	sbi-r.1 for 8055160	bdi-r.1 for 100831966	cre-r.1 for CHLRE_12g551100v5

Ortholog

Ortholog ID: 9439

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC25491811

uncharacterized LOC100785744

uncharacterized LOC100306460

uncharacterized LOC7494316

replicase polyprotein 1ab protein

uncharacterized LOC103852218

uncharacterized LOC100247606

uncharacterized LOC107959426

uncharacterized LOC107928397

uncharacterized LOC107959573

uncharacterized LOC106406315

uncharacterized LOC106408180

uncharacterized LOC102624952

uncharacterized LOC101266837

uncharacterized LOC102589298

uncharacterized LOC107829787

uncharacterized LOC4349444

uncharacterized LOC100194183

uncharacterized LOC123127976

uncharacterized LOC123051933

uncharacterized LOC123181631

uncharacterized LOC123438783

uncharacterized LOC8055160

uncharacterized LOC100831966

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	3
mtr00270	Cysteine and methionine metabolism	3
mtr00260	Glycine, serine and threonine metabolism	2
mtr00261	Monobactam biosynthesis	2
mtr00300	Lysine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2
cit04141	Protein processing in endoplasmic reticulum	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00290	Valine, leucine and isoleucine biosynthesis	3
nta00660	C5-Branched dibasic acid metabolism	3
nta01210	2-Oxocarboxylic acid metabolism	3
nta01230	Biosynthesis of amino acids	3
nta00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00900	Terpenoid backbone biosynthesis	3
zma03010	Ribosome	3
zma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

25491811

100785744

100306460

7494316

819096

103852218

100247606

107959426

107928397

107959573

106406315

106408180

102624952

101266837

102589298

107829787

4349444

100194183

123127976

123051933

123181631

123438783

8055160

100831966

5719662

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25491811 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25491811 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	1	1	1	1	3	2	1	1	1	1	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25491811 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25491811 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**