ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25492466	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
mtr-r.5	25492466	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
mtr-u.5	11436562	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
gma-u.5	100786319	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
gma-u.5	100789886	heavy-metal-associated domain-containing protein
ppo-u.5	7465136	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
ppo-u.5	7492259	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
ppo-u.5	7465274	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
ath-u.5	AT2G28660	Chloroplast-targeted copper chaperone protein
ath-u.5	NAKR2	Chloroplast-targeted copper chaperone protein
ath-u.5	NAKR3	Chloroplast-targeted copper chaperone protein
bra-r.6	103865594	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
bra-r.6	103864909	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
vvi-u.5	100244737	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
vvi-u.5	100263778	protein SODIUM POTASSIUM ROOT DEFECTIVE 1
ghi-r.1	107899273	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
ghi-r.1	107903148	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
bna-r.1	106451028	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like
bna-r.1	106352836	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
bna-r.1	106447378	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like
cit-r.1	102618369	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
cit-r.1	102616023	protein SODIUM POTASSIUM ROOT DEFECTIVE 3
sly-u.5	101266884	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
sly-u.5	101261297	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
sot-r.1	102581501	uncharacterized LOC102581501
sot-r.1	102593645	uncharacterized LOC102593645
nta-r.1	107770229	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
nta-r.1	107761519	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like
nta-r.1	107776858	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
osa-u.5	4334586	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
zma-u.5	100282516	uncharacterized LOC100282516
zma-u.5	100284782	metal ion binding protein
zma-u.5	103631560	uncharacterized LOC103631560
tae-r.2	123123465	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
tae-r.2	123113968	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
tae-r.2	123105648	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
hvu-r.1	123399209	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like
sbi-r.1	8057049	protein SODIUM POTASSIUM ROOT DEFECTIVE 2
bdi-r.1	100825274	protein SODIUM POTASSIUM ROOT DEFECTIVE 3

Top 50 coexpressed genes to 25492466 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25492466 (mtr-u.5 coexpression data)

CoexMap"25492466"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(2334 genes)

IEA

Protein

XP_013456061.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, vacu 1

(predict for XP_013456061.2)

Subcellular
localization
TargetP

other 4

(predict for XP_013456061.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25492466	mtr-r.5 for 25492466	mtr-u.5 for 11436562	gma-u.5 for 100786319	gma-u.5 for 100789886	ppo-u.5 for 7465136	ppo-u.5 for 7492259	ppo-u.5 for 7465274	ath-u.5 for AT2G28660	ath-u.5 for NAKR2	ath-u.5 for NAKR3	bra-r.6 for 103865594	bra-r.6 for 103864909	vvi-u.5 for 100244737	vvi-u.5 for 100263778	ghi-r.1 for 107899273	ghi-r.1 for 107903148	bna-r.1 for 106451028	bna-r.1 for 106352836	bna-r.1 for 106447378	cit-r.1 for 102618369	cit-r.1 for 102616023	sly-u.5 for 101266884	sly-u.5 for 101261297	sot-r.1 for 102581501	sot-r.1 for 102593645	nta-r.1 for 107770229	nta-r.1 for 107761519	nta-r.1 for 107776858	osa-u.5 for 4334586	zma-u.5 for 100282516	zma-u.5 for 100284782	zma-u.5 for 103631560	tae-r.2 for 123123465	tae-r.2 for 123113968	tae-r.2 for 123105648	hvu-r.1 for 123399209	sbi-r.1 for 8057049	bdi-r.1 for 100825274

Ortholog

Ortholog ID: 1912

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

NAKR2

NAKR3

Function^*

protein SODIUM POTASSIUM ROOT DEFECTIVE 3