ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25489830	RING-H2 finger protein ATL74-like
mtr-u.5	11432082	RING-H2 finger protein ATL74
gma-u.5	100787273	RING-H2 finger protein ATL74
gma-u.5	100810195	RING-H2 finger protein ATL74
gma-u.5	100814602	RING-H2 finger protein ATL74
ppo-u.5	7458811	RING-H2 finger protein ATL73
ppo-u.5	7472472	RING-H2 finger protein ATL74
ppo-u.5	7455234	RING-H2 finger protein ATL74
ath-u.5	AT3G10910	RING/U-box superfamily protein
ath-u.5	AT5G01880	RING/U-box superfamily protein
vvi-u.5	100243283	RING-H2 finger protein ATL74
vvi-u.5	100248379	RING-H2 finger protein ATL74
sly-u.5	101255204	RING-H2 finger protein ATL74
osa-u.5	107278369	RING-H2 finger protein ATL74
osa-u.5	4327616	RING-H2 finger protein ATL74
osa-u.5	4349606	RING-H2 finger protein ATL74-like
zma-u.5	103640726	RING-H2 finger protein ATL74

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024636419.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_024636419.1)

Subcellular
localization
TargetP

other 7

(predict for XP_024636419.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25489830	mtr-u.5 for 11432082	gma-u.5 for 100787273	gma-u.5 for 100810195	gma-u.5 for 100814602	ppo-u.5 for 7458811	ppo-u.5 for 7472472	ppo-u.5 for 7455234	ath-u.5 for AT3G10910	ath-u.5 for AT5G01880	vvi-u.5 for 100243283	vvi-u.5 for 100248379	sly-u.5 for 101255204	osa-u.5 for 107278369	osa-u.5 for 4327616	osa-u.5 for 4349606	zma-u.5 for 103640726

Ortholog

Ortholog ID: 2721

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

RING-H2 finger protein ATL74

RING/U-box superfamily protein

RING-H2 finger protein ATL72

RING-H2 finger protein ATL74

RING-H2 finger protein ATL73

RING-H2 finger protein ATL74

RING-H2 finger protein ATL74-like

RING-H2 finger protein ATL74

RING-H2 finger protein ATL74-like

RING-H2 finger protein ATL74

RING-H2 finger protein ATL74-like

RING-H2 finger protein ATL74

RING-H2 finger protein ATL74-like

RING-H2 finger protein ATL74

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4
gma00330	Arginine and proline metabolism	2
gma00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4
ath00941	Flavonoid biosynthesis	3
ath00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
ath00071	Fatty acid degradation	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	7
bra00941	Flavonoid biosynthesis	4
bra00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
bra00360	Phenylalanine metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	3
sly04626	Plant-pathogen interaction	3
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2
sly04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2
nta00071	Fatty acid degradation	2
nta00260	Glycine, serine and threonine metabolism	2
nta00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	4
zma01200	Carbon metabolism	4
zma01230	Biosynthesis of amino acids	3
zma00195	Photosynthesis	2
zma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00030	Pentose phosphate pathway	2
sbi00480	Glutathione metabolism	2
sbi01200	Carbon metabolism	2
sbi00910	Nitrogen metabolism	2
sbi00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

11432082

100814602

100808245

7455234

7464732

820261

831691

103847239

103850400

100248379

100243283

107962372

107914534

106431784

125581368

102625542

102613784

101255204

102581573

107783810

107794582

107278369

4349606

103640726

123091532

123086462

123440428

123446226

8067180

104584644

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25489830 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25489830 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	3	2	2	1	3	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25489830 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25489830 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**