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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25495356   transcription factor TCP13 
 mtr-u.5   25497543   transcription factor TCP17 
 gma-u.5   100816424   transcription factor TCP13 
 gma-u.5   100804574   transcription factor TCP5 
 gma-u.5   102665855   transcription factor TCP5 
 ppo-u.5   112327176   transcription factor TCP13 
 ppo-u.5   7467903   transcription factor TCP13 
 ath-u.5   PTF1   plastid transcription factor 1 
 ath-u.5   TCP17   TCP domain protein 17 
 ath-u.5   TCP5   TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 
 vvi-u.5   100263410   transcription factor TCP13 
 vvi-u.5   100852855   transcription factor TCP5 
 sly-u.5   TCP6   TCP transcription factor 6 
 sly-u.5   TCP5   TCP transcription factor 5 
 sly-u.5   TCP4   TCP transcription factor 4 
 osa-u.5   4327032   transcription factor PCF6-like 
 osa-u.5   4339298   transcription factor TCP13 
 zma-u.5   100194214   uncharacterized LOC100194214 
 zma-u.5   100284941   uncharacterized LOC100284941 
 zma-u.5   100281328   uncharacterized LOC100281328 

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Top 50 coexpressed genes to 25495356 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25495356 (mtr-u.5 coexpression data)

CoexMap"25493897"


mtrLOC25493897 | Entrez gene ID : 25493897      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 2 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (680 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1100 genes)  IEA  
Protein XP_013458007.2 [sequence] [blastp]
XP_024637615.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  plas 1,  extr 1  (predict for XP_013458007.2)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_024637615.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013458007.2)
other 7  (predict for XP_024637615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25495356

.
mtr-u.5
for
25497543

.
gma-u.5
for
100816424

.
gma-u.5
for
100804574

.
gma-u.5
for
102665855

.
ppo-u.5
for
112327176

.
ppo-u.5
for
7467903

.
ath-u.5
for
PTF1

.
ath-u.5
for
TCP17

.
ath-u.5
for
TCP5

.
vvi-u.5
for
100263410

.
vvi-u.5
for
100852855

.
sly-u.5
for
TCP6

.
sly-u.5
for
TCP5

.
sly-u.5
for
TCP4

.
osa-u.5
for
4327032

.
osa-u.5
for
4339298

.
zma-u.5
for
100194214

.
zma-u.5
for
100284941

.
zma-u.5
for
100281328

.


Ortholog ID: 1662
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna sbi sbi sot cit cit bdi bdi nta nta
Symbol PTF1 TCP5 LOC100803100 LOC100816424 TCP5 LOC4339298 LOC4327032 LOC100284941 LOC100194214 LOC103854927 LOC103860559 LOC100852855 LOC100263410 LOC112327176 LOC7467903 LOC25495356 LOC123079257 LOC123062141 LOC123416458 LOC123440284 LOC107946551 LOC107953484 LOC106438918 LOC8072107 LOC8080107 LOC102601022 LOC102610499 LOC102628733 LOC100831334 LOC100833785 LOC107775251 LOC107773728
Function* plastid transcription factor 1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 transcription factor TCP13 transcription factor TCP13 TCP transcription factor 5 transcription factor TCP13 transcription factor PCF6-like uncharacterized LOC100284941 uncharacterized LOC100194214 transcription factor TCP5 transcription factor TCP5 transcription factor TCP5 transcription factor TCP13 transcription factor TCP13 transcription factor TCP13 transcription factor TCP13 uncharacterized LOC123079257 uncharacterized LOC123062141 transcription factor PCF6-like uncharacterized LOC123440284 transcription factor TCP17 transcription factor TCP5 transcription factor TCP13-like uncharacterized LOC8072107 transcription factor PCF8 transcription factor TCP13-like transcription factor TCP5 transcription factor TCP17 transcription factor TCP24 transcription factor PCF6 transcription factor TCP5-like transcription factor TCP5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00902 Monoterpenoid biosynthesis 2
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00220 Arginine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 3
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 9
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00100 Steroid biosynthesis 2
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821061 836218 100803100 100816424 100736516 4339298 4327032 100284941 100194214 103854927 103860559 100852855 100263410 112327176 7467903 25495356 123079257 123062141 123416458 123440284 107946551 107953484 106438918 8072107 8080107 102601022 102610499 102628733 100831334 100833785 107775251 107773728
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