ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25495548	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-r.5	25495548	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	25497519	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	25495544	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	11417855	probable endo-1,3(4)-beta-glucanase ARB_01444
gma-u.5	100819911	probable endo-1,3(4)-beta-glucanase ARB_01444
gma-u.5	100819378	probable endo-1,3(4)-beta-glucanase ARB_01444
ppo-u.5	7494561	probable endo-1,3(4)-beta-glucanase ARB_01444
ath-u.5	AT5G15870	glycosyl hydrolase family 81 protein
bra-r.6	103851012	probable endo-1,3(4)-beta-glucanase ARB_01444
bra-r.6	103872595	probable endo-1,3(4)-beta-glucanase ARB_01444
bra-r.6	103846376	probable endo-1,3(4)-beta-glucanase ARB_01444
vvi-u.5	100251569	glucan endo-1,3-beta-D-glucosidase ARB_01444-like
vvi-u.5	100261655	ascus wall glucan endo-1,3-beta-D-glucosidase
ghi-r.1	107934228	probable endo-1,3(4)-beta-glucanase ARB_01444
ghi-r.1	107953955	probable endo-1,3(4)-beta-glucanase ARB_01444
bna-r.1	106424742	probable endo-1,3(4)-beta-glucanase ARB_01444
bna-r.1	106372183	probable endo-1,3(4)-beta-glucanase ARB_01444
cit-r.1	102627960	probable endo-1,3(4)-beta-glucanase ARB_01444
sly-u.5	101265981	glucan endo-1,3-beta-D-glucosidase-like
sly-u.5	101257148	glucan endo-1,3-beta-D-glucosidase
sly-u.5	101265693	glucan endo-1,3-beta-D-glucosidase
sot-r.1	102583519	putative endo-1,3(4)-beta-glucanase 2
sot-r.1	102585521	endo-1,3(4)-beta-glucanase 1-like
sot-r.1	102585857	putative endo-1,3(4)-beta-glucanase 2
nta-r.1	107824319	glucan endo-1,3-beta-D-glucosidase
nta-r.1	107806871	glucan endo-1,3-beta-D-glucosidase-like
nta-r.1	107801019	glucan endo-1,3-beta-D-glucosidase-like
osa-u.5	4346925	glucan endo-1,3-beta-D-glucosidase
zma-u.5	100216714	glycosyl hydrolase family 81 protein
zma-u.5	103638141	putative endo-1,3(4)-beta-glucanase 2
tae-r.2	123103642	probable endo-1,3(4)-beta-glucanase ARB_01444
tae-r.2	123080183	ascus wall endo-1,3(4)-beta-glucanase
tae-r.2	123062987	probable endo-1,3(4)-beta-glucanase ARB_01444
hvu-r.1	123395692	probable endo-1,3(4)-beta-glucanase ARB_01444
sbi-r.1	8056198	putative endo-1,3(4)-beta-glucanase 2
sbi-r.1	8068382	putative endo-1,3(4)-beta-glucanase 2
bdi-r.1	100846458	putative endo-1,3(4)-beta-glucanase 2
cre-r.1	CHLRE_12g513400v5	uncharacterized protein

Top 50 coexpressed genes to 25495548 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25495548 (mtr-u.5 coexpression data)

CoexMap"25495548"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0052861 [list] [network] endo-1,3(4)-beta-glucanase activity

(13 genes)

IEA

Protein

XP_013451225.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, chlo 1, cyto_plas 1

(predict for XP_013451225.1)

Subcellular
localization
TargetP

chlo 7, other 5

(predict for XP_013451225.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25495548	mtr-r.5 for 25495548	mtr-u.5 for 25497519	mtr-u.5 for 25495544	mtr-u.5 for 11417855	gma-u.5 for 100819911	gma-u.5 for 100819378	ppo-u.5 for 7494561	ath-u.5 for AT5G15870	bra-r.6 for 103851012	bra-r.6 for 103872595	bra-r.6 for 103846376	vvi-u.5 for 100251569	vvi-u.5 for 100261655	ghi-r.1 for 107934228	ghi-r.1 for 107953955	bna-r.1 for 106424742	bna-r.1 for 106372183	cit-r.1 for 102627960	sly-u.5 for 101265981	sly-u.5 for 101257148	sly-u.5 for 101265693	sot-r.1 for 102583519	sot-r.1 for 102585521	sot-r.1 for 102585857	nta-r.1 for 107824319	nta-r.1 for 107806871	nta-r.1 for 107801019	osa-u.5 for 4346925	zma-u.5 for 100216714	zma-u.5 for 103638141	tae-r.2 for 123103642	tae-r.2 for 123080183	tae-r.2 for 123062987	hvu-r.1 for 123395692	sbi-r.1 for 8056198	sbi-r.1 for 8068382	bdi-r.1 for 100846458	cre-r.1 for CHLRE_12g513400v5

Ortholog

Ortholog ID: 2238

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

probable endo-1,3(4)-beta-glucanase ARB_01444

uncharacterized LOC102665234

probable endo-1,3(4)-beta-glucanase ARB_01444

glycosyl hydrolase family 81 protein

probable endo-1,3(4)-beta-glucanase ARB_01444

glucan endo-1,3-beta-D-glucosidase ARB_01444-like

ascus wall glucan endo-1,3-beta-D-glucosidase

probable endo-1,3(4)-beta-glucanase ARB_01444

glucan endo-1,3-beta-D-glucosidase-like

glucan endo-1,3-beta-D-glucosidase

putative endo-1,3(4)-beta-glucanase 2

endo-1,3(4)-beta-glucanase 1-like

putative endo-1,3(4)-beta-glucanase 2

glucan endo-1,3-beta-D-glucosidase-like

glucan endo-1,3-beta-D-glucosidase

glycosyl hydrolase family 81 protein

putative endo-1,3(4)-beta-glucanase 2

probable endo-1,3(4)-beta-glucanase ARB_01444

putative endo-1,3(4)-beta-glucanase 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2
mtr00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	5
gma00020	Citrate cycle (TCA cycle)	3
gma01230	Biosynthesis of amino acids	3
gma00030	Pentose phosphate pathway	3
gma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00053	Ascorbate and aldarate metabolism	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01240	Biosynthesis of cofactors	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi01240	Biosynthesis of cofactors	2
vvi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00100	Steroid biosynthesis	5
bna00561	Glycerolipid metabolism	5
bna00564	Glycerophospholipid metabolism	5
bna00565	Ether lipid metabolism	5
bna00590	Arachidonic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	4
sot04016	MAPK signaling pathway - plant	2
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04620	Toll-like receptor signaling pathway	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3

Expression

Expression pattern

Entrez Gene ID^*

25496128

25495552

25495554

100810004

100796721

102665234

7494561

831444

103851012

103872595

103846376

100251569

100261655

107934228

107953955

106372183

102627960

101265981

101257148

101265693

102583519

102585521

102585857

107806871

107801019

107799688

4346925

100216714

103638141

123103642

123121419

123395692

8056198

8068382

100846458

5728534

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	1	1	3	2	2	2	1	3	3	3	1	2	3	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25495548 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25495548 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**