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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25500254   pre-mRNA-processing-splicing factor 8A 
 mtr-r.5   25500254   pre-mRNA-processing-splicing factor 8A 
 bna-r.1   125585264   pre-mRNA-processing-splicing factor 8A-like 
 tae-r.2   123068533   pre-mRNA-processing-splicing factor 8A 
 hvu-r.1   123412186   uncharacterized LOC123412186 

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Top 50 coexpressed genes to 25500254 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25500254 (mtr-u.5 coexpression data)

CoexMap"25500254"


mtrLOC25500254 | Entrez gene ID : 25500254      
Species mtr bna tae hvu sbi osa gma sot sly cit bra ath ppo vvi ghi zma cre nta bdi
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000244 [list] [network] spliceosomal tri-snRNP complex assembly  (8 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (155 genes)  IEA  
GO CC
GO:0005682 [list] [network] U5 snRNP  (16 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (54 genes)  IEA  
GO MF
GO:0030623 [list] [network] U5 snRNA binding  (5 genes)  IEA  
GO:0097157 [list] [network] pre-mRNA intronic binding  (5 genes)  IEA  
GO:0030619 [list] [network] U1 snRNA binding  (6 genes)  IEA  
GO:0030620 [list] [network] U2 snRNA binding  (6 genes)  IEA  
GO:0017070 [list] [network] U6 snRNA binding  (8 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (113 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013444065.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  mito 2,  plas 1,  chlo_mito 1  (predict for XP_013444065.3)
Subcellular
localization
TargetP
other 6  (predict for XP_013444065.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25500254
mtr-r.5
for
25500254
bna-r.1
for
125585264
tae-r.2
for
123068533
hvu-r.1
for
123412186


Ortholog ID: 19852
Species mtr bna tae hvu
Symbol LOC25500254 LOC125585264 LOC123068533 LOC123412186
Function* pre-mRNA-processing-splicing factor 8A pre-mRNA-processing-splicing factor 8A-like pre-mRNA-processing-splicing factor 8A uncharacterized LOC123412186
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03040 Spliceosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25500254 125585264 123068533 123412186
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