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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25500573   DNA-directed RNA polymerase III subunit 2 
 mtr-r.5   25500573   DNA-directed RNA polymerase III subunit 2 
 gma-u.5   100818991   DNA-directed RNA polymerase III subunit 2 
 gma-u.5   100790845   DNA-directed RNA polymerase III subunit 2 
 ppo-u.5   7464475   DNA-directed RNA polymerase III subunit 2 
 ath-u.5   NRPC2   nuclear RNA polymerase C2 
 vvi-u.5   100264262   DNA-directed RNA polymerase III subunit 2 
 sly-u.5   101254548   DNA-directed RNA polymerase III subunit 2-like 
 sly-u.5   101251637   DNA-directed RNA polymerase III subunit 2 
 osa-u.5   4333066   DNA-directed RNA polymerase III subunit 2 
 zma-u.5   103629391   DNA-directed RNA polymerase III subunit 2 

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Top 50 coexpressed genes to 25500573 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25500573 (mtr-u.5 coexpression data)

CoexMap"25500573"


mtrLOC25500573 | Entrez gene ID : 25500573      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03020 [list] [network] RNA polymerase (74 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (265 genes)  IEA  
GO CC
GO MF
GO:0032549 [list] [network] ribonucleoside binding  (7 genes)  IEA  
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (21 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_024627527.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  plas 1,  vacu 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024627527.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024627527.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25500573

.
mtr-r.5
for
25500573

.
gma-u.5
for
100818991

.
gma-u.5
for
100790845

.
ppo-u.5
for
7464475

.
ath-u.5
for
NRPC2

.
vvi-u.5
for
100264262

.
sly-u.5
for
101254548

.
sly-u.5
for
101251637

.
osa-u.5
for
4333066

.
zma-u.5
for
103629391

.


Ortholog ID: 7748
Species ath gma gma sly sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol NRPC2 LOC100818991 LOC100790845 LOC101251637 LOC101254548 LOC4333066 LOC103629391 LOC103827814 LOC100264262 LOC7464475 LOC25500573 LOC123136573 LOC123132501 LOC123401108 LOC107924482 LOC107927589 LOC106391306 LOC106378370 CHLRE_12g542800v5 LOC8077347 LOC102593864 LOC102600550 LOC102608510 LOC100839519 LOC107832626 LOC107811698
Function* nuclear RNA polymerase C2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2-like DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2-like uncharacterized protein DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2-like DNA-directed RNA polymerase III subunit 2-like DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2 DNA-directed RNA polymerase III subunit 2-like DNA-directed RNA polymerase III subunit 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 4
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03020 RNA polymerase 4
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834550 100818991 100790845 101251637 101254548 4333066 103629391 103827814 100264262 7464475 25500573 123136573 123132501 123401108 107924482 107927589 106391306 106378370 5719529 8077347 102593864 102600550 102608510 100839519 107832626 107811698
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