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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11416007   ras-related protein RABB1b 
 mtr-u.5   11407181   ras-related protein RABB1c 
 gma-u.5   100784816   ras-related protein RABB1c 
 gma-u.5   100797461   ras-related protein RABB1b-like 
 gma-u.5   100790031   ras-related protein RABB1b 
 ppo-u.5   18105986   ras-related protein RABB1c 
 ppo-u.5   7478579   ras-related protein RABB1b 
 ppo-u.5   7489186   ras-related protein RABB1c 
 ath-u.5   RABB1C   RAB GTPase homolog B1C 
 ath-u.5   GB2   GTP-binding 2 
 bra-r.6   103868349   ras-related protein RABB1c 
 bra-r.6   103872509   ras-related protein RABB1b 
 vvi-u.5   100263184   ras-related protein RABB1c 
 vvi-u.5   100260965   ras-related protein RABB1b 
 vvi-u.5   100243270   ras-related protein RABB1c 
 ghi-r.1   107956863   ras-related protein RABB1c 
 ghi-r.1   107897556   ras-related protein RABB1b 
 ghi-r.1   107898331   ras-related protein RABB1c 
 bna-r.1   111211993   ras-related protein RABB1c 
 bna-r.1   111207447   ras-related protein RABB1b-like 
 bna-r.1   106451448   ras-related protein RABB1b 
 cit-r.1   102607023   ras-related protein RABB1b 
 cit-r.1   102624822   ras-related protein RABB1c 
 sly-u.5   101253324   ras-related protein RABB1c 
 sly-u.5   101257123   ras-related protein RABB1b 
 sot-r.1   102600740   ras-related protein RABB1c-like 
 sot-r.1   102600913   ras-related protein RABB1c 
 sot-r.1   102592580   ras-related protein RABB1c-like 
 nta-r.1   107771805   ras-related protein RABB1b 
 nta-r.1   107814904   ras-related protein RABB1c 
 nta-r.1   107813663   ras-related protein RABB1c-like 
 osa-u.5   4329809   ras-related protein Rab-2-B 
 osa-u.5   4336117   ras-related protein Rab-2-B 
 zma-u.5   542765   ras-like gene 
 tae-r.2   123127566   ras-related protein Rab-2-B 
 tae-r.2   123137208   ras-related protein Rab-2-B 
 hvu-r.1   123405971   ras-related protein Rab-2-B 
 sbi-r.1   8058685   ras-related protein Rab-2-B 
 sbi-r.1   8055424   ras-related protein Rab-2-B 
 bdi-r.1   100833955   ras-related protein Rab-2-B 
 bdi-r.1   100846022   ras-related protein Rab-2-B 
 bdi-r.1   100823809   ras-related protein Rab-2-A 
 cre-r.1   CHLRE_09g390763v5   uncharacterized protein 

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Top 50 coexpressed genes to 11416007 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11416007 (mtr-u.5 coexpression data)

CoexMap"25500942"


mtrLOC25500942 | Entrez gene ID : 25500942      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 2 2 3 3 3 2 2 3 3 2 1 2 1 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (245 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (279 genes)  IEA  
Protein XP_013444902.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  vacu 1,  cyto_pero 1  (predict for XP_013444902.1)
Subcellular
localization
TargetP
scret 8,  other 6  (predict for XP_013444902.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11416007
mtr-u.5
for
11407181
gma-u.5
for
100784816
gma-u.5
for
100797461
gma-u.5
for
100790031
ppo-u.5
for
18105986
ppo-u.5
for
7478579
ppo-u.5
for
7489186
ath-u.5
for
RABB1C
ath-u.5
for
GB2
bra-r.6
for
103868349
bra-r.6
for
103872509
vvi-u.5
for
100263184
vvi-u.5
for
100260965
vvi-u.5
for
100243270
ghi-r.1
for
107956863
ghi-r.1
for
107897556
ghi-r.1
for
107898331
bna-r.1
for
111211993
bna-r.1
for
111207447
bna-r.1
for
106451448
cit-r.1
for
102607023
cit-r.1
for
102624822
sly-u.5
for
101253324
sly-u.5
for
101257123
sot-r.1
for
102600740
sot-r.1
for
102600913
sot-r.1
for
102592580
nta-r.1
for
107771805
nta-r.1
for
107814904
nta-r.1
for
107813663
osa-u.5
for
4329809
osa-u.5
for
4336117
zma-u.5
for
542765
tae-r.2
for
123127566
tae-r.2
for
123137208
hvu-r.1
for
123405971
sbi-r.1
for
8058685
sbi-r.1
for
8055424
bdi-r.1
for
100833955
bdi-r.1
for
100846022
bdi-r.1
for
100823809
cre-r.1
for
CHLRE_09g390763v5


Ortholog ID: 1512
Species mtr mtr gma gma gma ppo ppo ppo ath ath bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sot sot sot nta nta nta osa osa zma tae tae tae hvu sbi sbi bdi bdi bdi cre
Symbol LOC11416007 LOC11407181 LOC100784816 LOC100797461 LOC100790031 LOC18105986 LOC7478579 LOC7489186 RABB1C GB2 LOC103868349 LOC103862440 LOC100263184 LOC100260965 LOC100243270 LOC107926356 LOC107954732 LOC107892242 LOC111207447 LOC106437479 LOC106445061 LOC102607023 LOC102624822 LOC101257123 LOC101252198 LOC102600740 LOC102592580 LOC102586319 LOC107813663 LOC107774510 LOC107824202 LOC4329809 LOC4336117 LOC542765 LOC123127566 LOC123053592 LOC606344 LOC123405971 LOC8058685 LOC8055424 LOC100833955 LOC100846022 LOC100823809 CHLRE_09g390763v5
Function* ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c ras-related protein RABB1b-like ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c RAB GTPase homolog B1C GTP-binding 2 ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1b-like ras-related protein RABB1c ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c-like ras-related protein RABB1c-like ras-related protein RABB1b ras-related protein RABB1c-like ras-related protein RABB1c ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-like gene ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04130 SNARE interactions in vesicular transport 2
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04142 Lysosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo03272 Virion - Hepatitis viruses 2
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04120 Ubiquitin mediated proteolysis 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04130 SNARE interactions in vesicular transport 4
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 3
bna04142 Lysosome 3
bna00051 Fructose and mannose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 7
osa00190 Oxidative phosphorylation 6
osa04144 Endocytosis 4
osa04142 Lysosome 4
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 5
zma04144 Endocytosis 4
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01212 Fatty acid metabolism 3
tae00071 Fatty acid degradation 3
tae00410 beta-Alanine metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00410 beta-Alanine metabolism 8
tae00330 Arginine and proline metabolism 8
tae00071 Fatty acid degradation 7
tae01200 Carbon metabolism 5
tae00770 Pantothenate and CoA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi03250 Viral life cycle - HIV-1 3
sbi03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 4
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 5
cre03250 Viral life cycle - HIV-1 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11416007 11407181 100784816 100797461 100790031 18105986 7478579 7489186 827428 829740 103868349 103862440 100263184 100260965 100243270 107926356 107954732 107892242 111207447 106437479 106445061 102607023 102624822 101257123 101252198 102600740 102592580 102586319 107813663 107774510 107824202 4329809 4336117 542765 123127566 123053592 606344 123405971 8058685 8055424 100833955 100846022 100823809 5720639
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