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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501058   nuclear transcription factor Y subunit A-4 
 mtr-r.5   25501058   nuclear transcription factor Y subunit A-4 
 gma-u.5   NF-YA11   nuclear transcription factor Y subunit A-11 
 gma-u.5   NF-YA13   nuclear transcription factor Y subunit A-13 
 ppo-u.5   7480078   nuclear transcription factor Y subunit A-1 
 ppo-u.5   7467333   nuclear transcription factor Y subunit A-7 
 vvi-u.5   100248239   nuclear transcription factor Y subunit A-1 
 sly-u.5   101247462   nuclear transcription factor Y subunit A-9 
 osa-u.5   4333806   nuclear transcription factor Y subunit A-9 
 zma-u.5   100282719   uncharacterized LOC100282719 

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Top 50 coexpressed genes to 25501058 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501058 (mtr-u.5 coexpression data)

CoexMap"25501058"


mtrLOC25501058 | Entrez gene ID : 25501058      
Species mtr gma ppo vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi ath sbi cre
Paralog 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (21 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1100 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013445060.1 [sequence] [blastp]
XP_024627642.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013445060.1)
nucl 9  (predict for XP_024627642.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013445060.1)
other 8  (predict for XP_024627642.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501058

.
mtr-r.5
for
25501058

.
gma-u.5
for
NF-YA11

.
gma-u.5
for
NF-YA13

.
ppo-u.5
for
7480078

.
ppo-u.5
for
7467333

.
vvi-u.5
for
100248239

.
sly-u.5
for
101247462

.
osa-u.5
for
4333806

.
zma-u.5
for
100282719

.


Ortholog ID: 11874
Species gma gma sly osa zma vvi ppo ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol NF-YA11 NF-YA13 LOC101247462 LOC4333806 LOC100282719 LOC100248239 LOC7480078 LOC7467333 LOC25501058 LOC123090770 LOC123087187 LOC123447281 LOC107938342 LOC107950640 LOC110430629 LOC102589526 LOC102616312 LOC100846874 LOC107768790 LOC107830770
Function* nuclear transcription factor Y subunit A-11 nuclear transcription factor Y subunit A-13 nuclear transcription factor Y subunit A-9 nuclear transcription factor Y subunit A-9 uncharacterized LOC100282719 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1-like nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-9 uncharacterized LOC107830770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00071 Fatty acid degradation 2
mtr00410 beta-Alanine metabolism 2
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782085 100789738 101247462 4333806 100282719 100248239 7480078 7467333 25501058 123090770 123087187 123447281 107938342 107950640 110430629 102589526 102616312 100846874 107768790 107830770
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