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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501225   ribonuclease 3-like protein 2 
 mtr-r.5   25501225   ribonuclease 3-like protein 2 
 mtr-u.5   11421270   ribonuclease 3-like protein 2 
 mtr-u.5   11427553   endoribonuclease Dicer homolog 1 
 gma-u.5   100802288   ribonuclease 3-like protein 2 
 ppo-u.5   7483612   ribonuclease 3-like protein 2 
 ppo-u.5   7489887   ribonuclease 3-like protein 3 
 ath-u.5   RTL2   RNAse THREE-like protein 2 
 ath-u.5   RTL3   RNAse THREE-like protein 3 
 vvi-u.5   100260185   ribonuclease 3-like protein 3 
 vvi-u.5   100243580   ribonuclease 3-like protein 2 
 sly-u.5   101267583   ribonuclease 3-like protein 2 
 sly-u.5   109120336   ribonuclease 3-like protein 3 
 sly-u.5   101253789   ribonuclease 3-like protein 3 
 osa-u.5   4340996   ribonuclease 3-like protein 3 
 osa-u.5   4338262   ribonuclease 3-like protein 2 
 osa-u.5   4325844   ribonuclease 3-like protein 1 
 zma-u.5   100273842   uncharacterized LOC100273842 
 zma-u.5   100272891   Ribonuclease 3-like protein 2 

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Top 50 coexpressed genes to 25501225 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501225 (mtr-u.5 coexpression data)

CoexMap"25501225"


mtrLOC25501225 | Entrez gene ID : 25501225      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 2 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (21 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4514 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (17 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_013445393.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  pero 1,  nucl 1,  vacu 1  (predict for XP_013445393.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_013445393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501225
mtr-r.5
for
25501225
mtr-u.5
for
11421270
mtr-u.5
for
11427553
gma-u.5
for
100802288
ppo-u.5
for
7483612
ppo-u.5
for
7489887
ath-u.5
for
RTL2
ath-u.5
for
RTL3
vvi-u.5
for
100260185
vvi-u.5
for
100243580
sly-u.5
for
101267583
sly-u.5
for
109120336
sly-u.5
for
101253789
osa-u.5
for
4340996
osa-u.5
for
4338262
osa-u.5
for
4325844
zma-u.5
for
100273842
zma-u.5
for
100272891


Ortholog ID: 1271
Species mtr gma ppo ppo ath bra bra vvi vvi ghi ghi bna cit sly sot sot nta osa osa zma zma tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC25501225 LOC100802288 LOC7489887 LOC7483612 RTL2 LOC103860778 LOC103869324 LOC100260185 LOC100243580 LOC107932710 LOC107956815 LOC106434363 LOC102617758 LOC101248023 LOC102599964 LOC102598686 LOC107771465 LOC4340996 LOC4338262 LOC100273842 LOC100272891 LOC123151369 LOC123408939 LOC123410029 LOC8071008 LOC8061288 LOC100845957 LOC100825810 CHLRE_16g684715v5
Function* ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 RNAse THREE-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 uncharacterized LOC100273842 Ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03050 Proteasome 2
gma03272 Virion - Hepatitis viruses 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00020 Citrate cycle (TCA cycle) 3
ppo00620 Pyruvate metabolism 3
ppo01200 Carbon metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
bra04142 Lysosome 2
bra00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
ghi00052 Galactose metabolism 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 3
bna04626 Plant-pathogen interaction 2
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25501225 100802288 7489887 7483612 821587 103860778 103869324 100260185 100243580 107932710 107956815 106434363 102617758 101248023 102599964 102598686 107771465 4340996 4338262 100273842 100272891 123151369 123408939 123410029 8071008 8061288 100845957 100825810 5724419
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