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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   ndhF   NADH dehydrogenase subunit 5 
 ghi-r.1   107890068   NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic 
 ghi-r.1   121227931   NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic 
 ath-u.5   ndhF   NADH dehydrogenase subunit 5 
 bna-r.1   ndhF   NADH dehydrogenase subunit 5 
 cit-r.1   ndhF   NADH dehydrogenase subunit 5 
 gma-u.5   ndhF   NADH dehydrogenase subunit 5 
 vvi-u.5   ndhF   NADH dehydrogenase subunit 5 
 ppo-u.5   ndhF   NADH dehydrogenase subunit 5 
 mtr-u.5   120580928   NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic-like 
 mtr-u.5   ndhF   NADH dehydrogenase subunit 5 
 mtr-u.5   120580161   NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic 
 sly-u.5   ndhF   NADH-plastoquinone oxidoreductase subunit 5 
 sot-r.1   ndhF   NADH dehydrogenase subunit 5 
 nta-r.1   ndhF   NADH dehydrogenase subunit 5 
 osa-u.5   ndhF   NADH dehydrogenase subunit 5 
 zma-u.5   ndhF   NADH dehydrogenase subunit 5 
 sbi-r.1   ndhF   NADH dehydrogenase subunit 5 
 bdi-r.1   ndhF   NADH dehydrogenase subunit 5 

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Top 50 coexpressed genes to ndhF (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ndhF (ghi-r.1 coexpression data)

CoexMap"3989245"


ghindhF | Entrez gene ID : 3989245    
Species ghi ath bna cit gma vvi ppo mtr sly sot nta osa zma sbi bdi cre bra tae hvu
Paralog 3 1 1 1 1 1 1 3 1 1 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00190 [list] [network] Oxidative phosphorylation (393 genes)
GO BP
GO CC
GO MF
Protein YP_538993.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto 2,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for YP_538993.1)
Subcellular
localization
TargetP
scret 8,  other 4  (predict for YP_538993.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
ndhF
ghi-r.1
for
107890068
ghi-r.1
for
121227931
ath-u.5
for
ndhF
bna-r.1
for
ndhF
cit-r.1
for
ndhF
gma-u.5
for
ndhF
vvi-u.5
for
ndhF
ppo-u.5
for
ndhF
mtr-u.5
for
120580928
mtr-u.5
for
ndhF
mtr-u.5
for
120580161
sly-u.5
for
ndhF
sot-r.1
for
ndhF
nta-r.1
for
ndhF
osa-u.5
for
ndhF
zma-u.5
for
ndhF
sbi-r.1
for
ndhF
bdi-r.1
for
ndhF


Ortholog ID: 11143
Species ghi ghi ghi ath bna cit gma vvi ppo mtr mtr mtr sly sot nta osa zma sbi bdi
Symbol ndhF LOC107890068 LOC121227931 ndhF ndhF ndhF ndhF ndhF ndhF LOC120580928 ndhF LOC120580161 ndhF ndhF ndhF ndhF ndhF ndhF ndhF
Function* NADH dehydrogenase subunit 5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic-like NADH dehydrogenase subunit 5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic NADH-plastoquinone oxidoreductase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5 NADH dehydrogenase subunit 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00190 Oxidative phosphorylation 4
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 8
ghi03010 Ribosome 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 5
ghi00190 Oxidative phosphorylation 4
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit00970 Aminoacyl-tRNA biosynthesis 5
cit00190 Oxidative phosphorylation 4
cit00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma03010 Ribosome 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 11
vvi00195 Photosynthesis 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 7
ppo03010 Ribosome 6
ppo00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr00190 Oxidative phosphorylation 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr00190 Oxidative phosphorylation 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 8
mtr00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 9
sot00195 Photosynthesis 5
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 9
nta00190 Oxidative phosphorylation 6
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
zma00190 Oxidative phosphorylation 5
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi03010 Ribosome 5
sbi03020 RNA polymerase 4
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3989245 107890068 121227931 844705 11542076 4271110 3989365 4025035 4929737 120580928 5333117 120580161 3950404 4099901 800484 3131400 845185 4549148 6439789
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