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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   psbE   cytochrome b559 alpha subunit 
 vvi-r.5   psbE   cytochrome b559 alpha subunit 
 ath-u.5   psbE   photosystem II protein V 
 gma-u.5   psbE   cytochrome b559 alpha subunit 
 ppo-u.5   psbE   photosystem II protein V 
 mtr-u.5   psbE   photosystem II protein V 
 ghi-r.1   psbE   cytochrome b559 alpha subunit 
 cit-r.1   psbE   photosystem II protein V 
 sly-u.5   psbE   photosystem II cytochrome b559 alpha subunit 
 sot-r.1   psbE   photosystem II protein V 
 nta-r.1   psbE   cytochrome b559 alpha subunit 
 osa-u.5   psbE   photosystem II protein V 
 zma-u.5   psbE   photosystem II protein V 
 bdi-r.1   psbE   photosystem II protein V 

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Top 50 coexpressed genes to psbE (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psbE (vvi-u.5 coexpression data)

CoexMap"4025054"


vvipsbE | Entrez gene ID : 4025054    
Species vvi ath gma ppo mtr ghi cit sly sot nta osa zma bdi tae bna cre sbi bra hvu
Paralog 2 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00195 [list] [network] Photosynthesis (102 genes)
GO BP
GO CC
GO MF
Protein YP_567093.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for YP_567093.1)
Subcellular
localization
TargetP
other 6  (predict for YP_567093.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
psbE
vvi-r.5
for
psbE
ath-u.5
for
psbE
gma-u.5
for
psbE
ppo-u.5
for
psbE
mtr-u.5
for
psbE
ghi-r.1
for
psbE
cit-r.1
for
psbE
sly-u.5
for
psbE
sot-r.1
for
psbE
nta-r.1
for
psbE
osa-u.5
for
psbE
zma-u.5
for
psbE
bdi-r.1
for
psbE


Ortholog ID: 12056
Species vvi ath gma ppo mtr ghi cit sly sot nta osa zma bdi
Symbol psbE psbE psbE psbE psbE psbE psbE psbE psbE psbE psbE psbE psbE
Function* cytochrome b559 alpha subunit photosystem II protein V cytochrome b559 alpha subunit photosystem II protein V photosystem II protein V cytochrome b559 alpha subunit photosystem II protein V photosystem II cytochrome b559 alpha subunit photosystem II protein V cytochrome b559 alpha subunit photosystem II protein V photosystem II protein V photosystem II protein V
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 7
ath00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 15
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 13
ppo00190 Oxidative phosphorylation 5
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 12
mtr00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi01200 Carbon metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00710 Carbon fixation by Calvin cycle 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 12
cit03010 Ribosome 4
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 6
sly00190 Oxidative phosphorylation 4
sly03010 Ribosome 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot00190 Oxidative phosphorylation 5
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 9
nta00190 Oxidative phosphorylation 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
osa00190 Oxidative phosphorylation 5
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00190 Oxidative phosphorylation 5
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4025054 844745 3989313 4929687 5333183 3989166 4271222 3950399 4099861 800531 3131413 845203 6439879
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