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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   psaA   photosystem I P700 apoprotein A1 
 vvi-r.5   psaA   photosystem I P700 apoprotein A1 
 ath-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 
 gma-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 
 ppo-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 
 mtr-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 
 mtr-u.5   120580066   photosystem I P700 chlorophyll a apoprotein A1 
 mtr-u.5   120579653   photosystem I P700 chlorophyll a apoprotein A1 
 sly-u.5   psaA   photosystem I P700 apoprotein A1 
 osa-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 
 zma-u.5   118474849   photosystem I P700 chlorophyll a apoprotein A1 
 zma-u.5   psaA   photosystem I P700 chlorophyll a apoprotein A1 

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Top 50 coexpressed genes to psaA (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psaA (vvi-u.5 coexpression data)

CoexMap"4025091"


vvipsaA | Entrez gene ID : 4025091    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00195 [list] [network] Photosynthesis (102 genes)
GO BP
GO CC
GO MF
Protein YP_567076.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 1,  nucl 1,  cyto 1,  mito 1,  pero 1,  cyto_nucl 1,  chlo_mito 1,  cyto_pero 1  (predict for YP_567076.1)
Subcellular
localization
TargetP
other 8  (predict for YP_567076.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
psaA
vvi-r.5
for
psaA
ath-u.5
for
psaA
gma-u.5
for
psaA
ppo-u.5
for
psaA
mtr-u.5
for
psaA
mtr-u.5
for
120580066
mtr-u.5
for
120579653
sly-u.5
for
psaA
osa-u.5
for
psaA
zma-u.5
for
118474849
zma-u.5
for
psaA


Ortholog ID: 2961
Species vvi ath gma ppo mtr mtr ghi ghi bna cit sly sot nta osa zma zma hvu hvu sbi bdi
Symbol psaA psaA psaA psaA LOC120579653 LOC120577099 LOC121230426 psaA psaA psaA psaA psaA psaA psaA LOC118474849 psaA LOC123419401 LOC123421961 psaA psaA
Function* photosystem I P700 apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1-like photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 apoprotein A1 photosystem I P700 apoprotein A1 PSI P700 apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1 photosystem I P700 chlorophyll a apoprotein A1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 14
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 16
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
ppo00970 Aminoacyl-tRNA biosynthesis 6
ppo00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 12
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 15
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 10
sot03020 RNA polymerase 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa03010 Ribosome 5
osa00190 Oxidative phosphorylation 4
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00190 Oxidative phosphorylation 4
zma03010 Ribosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 13
zma03010 Ribosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 19
hvu00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 20
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 10
sbi00190 Oxidative phosphorylation 8
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 10
bdi00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4025091 844768 3989266 4929663 120579653 120577099 121230426 3989214 11541979 4271131 3950484 4099969 800453 3131406 118474849 845195 123419401 123421961 4549120 6439778
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