ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4326449	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
osa-r.6	4326449	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
osa-m.8	4326449	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
osa-e.1	4326449	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
zma-u.5	732747	sterol-8,7-isomerase
zma-u.5	103649921	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
ath-u.5	HYD1	C-8,7 sterol isomerase
gma-u.5	100305885	uncharacterized LOC100305885
gma-u.5	100815125	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
gma-u.5	100783787	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
sly-u.5	HYD1	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
vvi-u.5	100263963	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
ppo-u.5	7496516	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
mtr-u.5	25496873	probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

Annotation

functional annotation

KEGG

osa00100 [list] [network] Steroid biosynthesis (41 genes)

GO BP

GO:0016126 [list] [network] sterol biosynthetic process

(24 genes)

IEA

GO CC

GO:0005783 [list] [network] endoplasmic reticulum	(512 genes)	IEA
GO:0016020 [list] [network] membrane	(3446 genes)	IEA

GO MF

GO:0000247 [list] [network] C-8 sterol isomerase activity	(1 genes)	IEA
GO:0004769 [list] [network] steroid Delta-isomerase activity	(1 genes)	IEA
GO:0047750 [list] [network] cholestenol delta-isomerase activity	(1 genes)	IEA

Protein

NP_001384925.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, E.R. 2, nucl 1, extr 1, vacu 1

(predict for NP_001384925.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001384925.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4326449	osa-r.6 for 4326449	osa-m.8 for 4326449	osa-e.1 for 4326449	zma-u.5 for 732747	zma-u.5 for 103649921	ath-u.5 for HYD1	gma-u.5 for 100305885	gma-u.5 for 100815125	gma-u.5 for 100783787	sly-u.5 for HYD1	vvi-u.5 for 100263963	ppo-u.5 for 7496516	mtr-u.5 for 25496873

Ortholog

Ortholog ID: 4309

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HYD1

HYD1

SI1

Function^*

probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

sterol-8,7-isomerase

probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

C-8,7 sterol isomerase

probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

putative C-8,7 sterol isomerase

probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

putative 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	4
osa04141	Protein processing in endoplasmic reticulum	3
osa00190	Oxidative phosphorylation	3
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	3
hvu01250	Biosynthesis of nucleotide sugars	3
hvu00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03010	Ribosome	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma03060	Protein export	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3
zma00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04146	Peroxisome	4
sbi04120	Ubiquitin mediated proteolysis	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi03083	Polycomb repressive complex	2
sbi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	6
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	4
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00100	Steroid biosynthesis	3
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	8
sly00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	2
vvi03420	Nucleotide excision repair	2
vvi03430	Mismatch repair	2
vvi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03060	Protein export	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6
ghi00510	N-Glycan biosynthesis	4
ghi00100	Steroid biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	4
ghi00190	Oxidative phosphorylation	4
ghi00100	Steroid biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7
bna03050	Proteasome	5
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7
bna03050	Proteasome	5
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	10
sot00996	Biosynthesis of various alkaloids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00904	Diterpenoid biosynthesis	2
cit00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	4
cit00190	Oxidative phosphorylation	3
cit03060	Protein export	2
cit04141	Protein processing in endoplasmic reticulum	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	7
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	7
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00100	Steroid biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

4326449

123068681

123442723

100828892

732747

103649921

8085050

8085052

838593

100815125

100783250

101259646

103872807

100263963

7496516

25496873

107888454

107888521

106410538

106389651

102577874

102618211

102606772

107810836

107768926

5728360

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4326449 (osa-u.5 coexpression data)

Top 50 enrichment test to 4326449 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	4	2	1	3	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4326449 (osa-u.5 coexpression data)

Top 50 enrichment test to 4326449 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**