ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4327338	casein kinase 1-like protein HD16
osa-r.6	4327338	casein kinase 1-like protein HD16
osa-e.1	4327338	casein kinase 1-like protein HD16
osa-u.5	4324710	casein kinase 1-like protein HD16
osa-u.5	4326170	casein kinase 1-like protein HD16
osa-u.5	4334396	casein kinase 1-like protein HD16
tae-r.2	123069191	casein kinase 1-like protein HD16
tae-r.2	123101901	casein kinase 1-like protein HD16
tae-r.2	123123144	casein kinase 1-like protein HD16
hvu-r.1	123452645	casein kinase 1-like protein HD16
hvu-r.1	123444530	casein kinase 1-like protein HD16
bdi-r.1	100845295	casein kinase 1-like protein HD16
bdi-r.1	100836999	casein kinase 1-like protein HD16
bdi-r.1	100821235	casein kinase 1-like protein HD16
zma-u.5	100273539	uncharacterized LOC100273539
zma-u.5	100384745	uncharacterized LOC100384745
zma-u.5	100286103	ATP binding protein
sbi-r.1	110432526	casein kinase 1-like protein HD16
sbi-r.1	110437676	casein kinase 1-like protein HD16
sbi-r.1	110433807	casein kinase 1-like protein HD16
ath-u.5	AT5G18190	Protein kinase family protein
ath-u.5	AT2G25760	Protein kinase family protein
ath-u.5	AT3G03940	Protein kinase family protein
gma-u.5	100807373	casein kinase 1-like protein HD16
gma-u.5	100803733	casein kinase 1-like protein HD16
sly-u.5	101268442	casein kinase 1-like protein HD16
sly-u.5	101245026	casein kinase 1-like protein HD16
bra-r.6	103855200	casein kinase 1-like protein HD16
bra-r.6	103851164	casein kinase 1-like protein HD16
bra-r.6	103845859	casein kinase 1-like protein HD16
vvi-u.5	100263956	casein kinase 1-like protein HD16
vvi-u.5	100254414	casein kinase 1-like protein HD16
vvi-u.5	100253221	casein kinase 1-like protein HD16
ppo-u.5	7491038	casein kinase 1-like protein HD16
ppo-u.5	7478417	casein kinase 1-like protein HD16
ppo-u.5	7476691	casein kinase 1-like protein HD16
mtr-u.5	25490136	casein kinase 1-like protein HD16
mtr-u.5	11417788	casein kinase 1-like protein HD16
mtr-u.5	11419592	casein kinase 1-like protein HD16
ghi-r.1	107893405	casein kinase 1-like protein HD16
ghi-r.1	107897345	casein kinase 1-like protein HD16
ghi-r.1	107893255	casein kinase 1-like protein HD16
bna-r.1	106387773	casein kinase 1-like protein HD16
bna-r.1	106397522	casein kinase 1-like protein HD16
bna-r.1	106418584	casein kinase 1-like protein HD16
sot-r.1	102603072	uncharacterized LOC102603072
sot-r.1	102599332	uncharacterized LOC102599332
sot-r.1	102583902	uncharacterized LOC102583902
cit-r.1	102618306	hypothetical protein
cit-r.1	102607770	casein kinase 1-like protein HD16
cit-r.1	102627154	casein kinase 1-like protein HD16
nta-r.1	107763246	casein kinase 1-like protein HD16
nta-r.1	107770915	casein kinase 1-like protein HD16
nta-r.1	107773087	casein kinase 1-like protein HD16
cre-r.1	CHLRE_16g666200v5	uncharacterized protein
cre-r.1	CHLRE_06g281100v5	uncharacterized protein

Top 50 coexpressed genes to 4327338 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4327338 (osa-u.5 coexpression data)

CoexMap"4327338"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006897 [list] [network] endocytosis	(61 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(86 genes)	IEA
GO:0007165 [list] [network] signal transduction	(779 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(3003 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5212 genes)	IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(644 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2335 genes)	IEA

Protein

XP_015621547.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, nucl 2, cysk_nucl 1, E.R._vacu 1, chlo 1

(predict for XP_015621547.1)

Subcellular
localization
TargetP

mito 5, other 5

(predict for XP_015621547.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4327338	osa-r.6 for 4327338	osa-e.1 for 4327338	osa-u.5 for 4324710	osa-u.5 for 4326170	osa-u.5 for 4334396	tae-r.2 for 123069191	tae-r.2 for 123101901	tae-r.2 for 123123144	hvu-r.1 for 123452645	hvu-r.1 for 123444530	bdi-r.1 for 100845295	bdi-r.1 for 100836999	bdi-r.1 for 100821235	zma-u.5 for 100273539	zma-u.5 for 100384745	zma-u.5 for 100286103	sbi-r.1 for 110432526	sbi-r.1 for 110437676	sbi-r.1 for 110433807	ath-u.5 for AT5G18190	ath-u.5 for AT2G25760	ath-u.5 for AT3G03940	gma-u.5 for 100807373	gma-u.5 for 100803733	sly-u.5 for 101268442	sly-u.5 for 101245026	bra-r.6 for 103855200	bra-r.6 for 103851164	bra-r.6 for 103845859	vvi-u.5 for 100263956	vvi-u.5 for 100254414	vvi-u.5 for 100253221	ppo-u.5 for 7491038	ppo-u.5 for 7478417	ppo-u.5 for 7476691	mtr-u.5 for 25490136	mtr-u.5 for 11417788	mtr-u.5 for 11419592	ghi-r.1 for 107893405	ghi-r.1 for 107897345	ghi-r.1 for 107893255	bna-r.1 for 106387773	bna-r.1 for 106397522	bna-r.1 for 106418584	sot-r.1 for 102603072	sot-r.1 for 102599332	sot-r.1 for 102583902	cit-r.1 for 102618306	cit-r.1 for 102607770	cit-r.1 for 102627154	nta-r.1 for 107763246	nta-r.1 for 107770915	nta-r.1 for 107773087	cre-r.1 for CHLRE_16g666200v5	cre-r.1 for CHLRE_06g281100v5

Ortholog

Ortholog ID: 309

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*