ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4327756	uncharacterized LOC4327756
osa-r.6	4327756	uncharacterized LOC4327756
osa-m.8	4327756	uncharacterized LOC4327756
osa-e.1	4327756	uncharacterized LOC4327756
osa-u.5	4334669	uncharacterized LOC4334669
osa-u.5	4325682	uncharacterized LOC4325682
osa-u.5	4323985	uncharacterized LOC4323985
tae-r.2	123181166	uncharacterized LOC123181166
tae-r.2	123087817	uncharacterized LOC123087817
hvu-r.1	123453168	uncharacterized LOC123453168
hvu-r.1	123443628	uncharacterized LOC123443628
hvu-r.1	123432297	uncharacterized LOC123432297
bdi-r.1	100834689	uncharacterized LOC100834689
bdi-r.1	100832060	uncharacterized LOC100832060
bdi-r.1	100829093	uncharacterized LOC100829093
zma-u.5	100277764	uncharacterized LOC100277764
zma-u.5	100382838	uncharacterized LOC100382838
zma-u.5	100274029	uncharacterized LOC100274029
sbi-r.1	8080198	uncharacterized LOC8080198
sbi-r.1	8065819	uncharacterized LOC8065819
sbi-r.1	8073334	uncharacterized LOC8073334
ath-u.5	AT2G01260	hypothetical protein (DUF789)
ath-u.5	AT1G73210	hypothetical protein (DUF789)
ath-u.5	AT1G03610	plant/protein (DUF789)
gma-u.5	100792580	uncharacterized LOC100792580
gma-u.5	100786536	uncharacterized LOC100786536
sly-u.5	101263755	uncharacterized LOC101263755
sly-u.5	101263727	uncharacterized LOC101263727
sly-u.5	101260180	uncharacterized LOC101260180
bra-r.6	103872296	uncharacterized LOC103872296
bra-r.6	103872562	uncharacterized LOC103872562
bra-r.6	103875026	uncharacterized LOC103875026
vvi-u.5	100256001	uncharacterized LOC100256001
vvi-u.5	100241481	uncharacterized LOC100241481
vvi-u.5	100243435	uncharacterized LOC100243435
ppo-u.5	18101872	uncharacterized LOC18101872
ppo-u.5	18102559	uncharacterized LOC18102559
ppo-u.5	18106706	uncharacterized LOC18106706
mtr-u.5	120577741	uncharacterized LOC120577741
mtr-u.5	25491993	uncharacterized LOC25491993
ghi-r.1	107909263	uncharacterized LOC107909263
ghi-r.1	107910986	uncharacterized LOC107910986
ghi-r.1	107912353	uncharacterized LOC107912353
bna-r.1	125610213	uncharacterized LOC125610213
bna-r.1	BNAA09G01560D	uncharacterized BNAA09G01560D
bna-r.1	106436231	uncharacterized LOC106436231
sot-r.1	102606391	uncharacterized LOC102606391
sot-r.1	107059010	uncharacterized LOC107059010
sot-r.1	102604966	uncharacterized LOC102604966
cit-r.1	102619406	hypothetical protein
cit-r.1	102606915	uncharacterized LOC102606915
cit-r.1	102608329	uncharacterized LOC102608329
nta-r.1	107759236	uncharacterized LOC107759236
nta-r.1	107780077	uncharacterized LOC107780077
cre-r.1	CHLRE_17g744797v5	uncharacterized protein

Top 50 coexpressed genes to 4327756 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4327756 (osa-u.5 coexpression data)

CoexMap"4327756"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015622162.1 [sequence] [blastp]
XP_015622169.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, nucl_plas 3, cyto 1, chlo_mito 1	(predict for XP_015622162.1)
nucl 4, chlo 3, nucl_plas 3, cyto 1, chlo_mito 1	(predict for XP_015622169.1)

Subcellular
localization
TargetP

mito 6	(predict for XP_015622162.1)
mito 6	(predict for XP_015622169.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4327756	osa-r.6 for 4327756	osa-m.8 for 4327756	osa-e.1 for 4327756	osa-u.5 for 4334669	osa-u.5 for 4325682	osa-u.5 for 4323985	tae-r.2 for 123181166	tae-r.2 for 123087817	hvu-r.1 for 123453168	hvu-r.1 for 123443628	hvu-r.1 for 123432297	bdi-r.1 for 100834689	bdi-r.1 for 100832060	bdi-r.1 for 100829093	zma-u.5 for 100277764	zma-u.5 for 100382838	zma-u.5 for 100274029	sbi-r.1 for 8080198	sbi-r.1 for 8065819	sbi-r.1 for 8073334	ath-u.5 for AT2G01260	ath-u.5 for AT1G73210	ath-u.5 for AT1G03610	gma-u.5 for 100792580	gma-u.5 for 100786536	sly-u.5 for 101263755	sly-u.5 for 101263727	sly-u.5 for 101260180	bra-r.6 for 103872296	bra-r.6 for 103872562	bra-r.6 for 103875026	vvi-u.5 for 100256001	vvi-u.5 for 100241481	vvi-u.5 for 100243435	ppo-u.5 for 18101872	ppo-u.5 for 18102559	ppo-u.5 for 18106706	mtr-u.5 for 120577741	mtr-u.5 for 25491993	ghi-r.1 for 107909263	ghi-r.1 for 107910986	ghi-r.1 for 107912353	bna-r.1 for 125610213	bna-r.1 for BNAA09G01560D	bna-r.1 for 106436231	sot-r.1 for 102606391	sot-r.1 for 107059010	sot-r.1 for 102604966	cit-r.1 for 102619406	cit-r.1 for 102606915	cit-r.1 for 102608329	nta-r.1 for 107759236	nta-r.1 for 107780077	cre-r.1 for CHLRE_17g744797v5

Ortholog

Ortholog ID: 240

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC4325682

uncharacterized LOC4348991

uncharacterized LOC4342828

uncharacterized LOC123181166

uncharacterized LOC123046914

uncharacterized LOC123114112

uncharacterized LOC123453168

uncharacterized LOC123443628

uncharacterized LOC123432297

uncharacterized LOC100834689

uncharacterized LOC100832060

uncharacterized LOC100842270

uncharacterized LOC100277764

uncharacterized LOC100272386

uncharacterized LOC100194082

uncharacterized LOC8080198

uncharacterized LOC8065819

uncharacterized LOC8078182

Stu1, putative (DUF789)

hypothetical protein (DUF789)

uncharacterized LOC100792580

uncharacterized LOC100803393

uncharacterized LOC100816914

uncharacterized LOC101263727

uncharacterized LOC101255172

uncharacterized LOC103835939

uncharacterized LOC103852833

uncharacterized LOC103858697

uncharacterized LOC100256001

uncharacterized LOC100244012

uncharacterized LOC100258588

uncharacterized LOC18107913

uncharacterized LOC18101511

uncharacterized LOC7494424

uncharacterized LOC25491993

uncharacterized LOC25487628

uncharacterized LOC11444993

uncharacterized LOC107922439

uncharacterized LOC107926539

uncharacterized LOC121213703

uncharacterized BNAC05G11350D

uncharacterized LOC125590556

uncharacterized BNAA08G22930D

uncharacterized LOC102606391

uncharacterized LOC102588434

uncharacterized LOC102596639

hypothetical protein

uncharacterized LOC102608954

uncharacterized LOC102630953

uncharacterized LOC107803940

uncharacterized LOC107819534

uncharacterized LOC107783951

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	5
osa00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03420	Nucleotide excision repair	3
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma01250	Biosynthesis of nucleotide sugars	2
zma00230	Purine metabolism	2
zma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	4
sbi00500	Starch and sucrose metabolism	4
sbi00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	5
ath00030	Pentose phosphate pathway	4
ath00480	Glutathione metabolism	4
ath00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	6
gma00640	Propanoate metabolism	2
gma00785	Lipoic acid metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03015	mRNA surveillance pathway	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00052	Galactose metabolism	2
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00770	Pantothenate and CoA biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	2
ghi04148	Efferocytosis	2
ghi00061	Fatty acid biosynthesis	2
ghi00620	Pyruvate metabolism	2
ghi00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta03018	RNA degradation	4
nta03030	DNA replication	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00330	Arginine and proline metabolism	2
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4325682

4348991

4342828

123181166

123046914

123114112

123453168

123443628

123432297

100834689

100832060

100842270

100277764

100272386

100194082

8080198

8065819

8078182

830734

828930

827928

100792580

100803393

100816914

101263727

101255172

103835939

103852833

103858697

100256001

100244012

100258588

18107913

18101511

7494424

25491993

25487628

11444993

107922439

107926539

121213703

106439979

125590556

106391562

102606391

102588434

102596639

102619406

102608954

102630953

107803940

107819534

107783951

66057207

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	7	2	3	3	3	3	3	2	3	3	3	3	2	3	3	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4327756 (osa-u.5 coexpression data)

Top 50 enrichment test to 4327756 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**