ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4327776	uncharacterized LOC4327776
osa-r.6	4327776	uncharacterized LOC4327776
osa-m.8	4327776	uncharacterized LOC4327776
osa-e.1	4327776	uncharacterized LOC4327776
tae-r.2	123069402	uncharacterized LOC123069402
tae-r.2	123077901	uncharacterized LOC123077901
tae-r.2	123060826	uncharacterized LOC123060826
hvu-r.1	123443284	uncharacterized LOC123443284
bdi-r.1	100836439	uncharacterized LOC100836439
zma-u.5	103649536	uncharacterized LOC103649536
sbi-r.1	110433558	uncharacterized LOC110433558
ath-u.5	AT5G42070	uncharacterized protein
gma-u.5	100810596	uncharacterized LOC100810596
gma-u.5	100788535	uncharacterized LOC100788535
sly-u.5	104648938	uncharacterized LOC104648938
bra-r.6	103864139	uncharacterized LOC103864139
bra-r.6	103850252	uncharacterized LOC103850252
vvi-u.5	100264984	uncharacterized LOC100264984
ppo-u.5	7467074	uncharacterized LOC7467074
ppo-u.5	7497857	uncharacterized LOC7497857
mtr-u.5	25502209	uncharacterized LOC25502209
ghi-r.1	107947182	uncharacterized LOC107947182
ghi-r.1	107947136	uncharacterized LOC107947136
bna-r.1	111211052	uncharacterized LOC111211052
bna-r.1	125586289	uncharacterized LOC125586289
bna-r.1	BNAC06G13920D	uncharacterized BNAC06G13920D
sot-r.1	102578852	uncharacterized LOC102578852
cit-r.1	102627756	uncharacterized LOC102627756
nta-r.1	107764385	uncharacterized LOC107764385
nta-r.1	107767592	uncharacterized LOC107767592
cre-r.1	CHLRE_02g074100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(655 genes)

IEA

GO MF

Protein

XP_015631916.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_015631916.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_015631916.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4327776	osa-r.6 for 4327776	osa-m.8 for 4327776	osa-e.1 for 4327776	tae-r.2 for 123069402	tae-r.2 for 123077901	tae-r.2 for 123060826	hvu-r.1 for 123443284	bdi-r.1 for 100836439	zma-u.5 for 103649536	sbi-r.1 for 110433558	ath-u.5 for AT5G42070	gma-u.5 for 100810596	gma-u.5 for 100788535	sly-u.5 for 104648938	bra-r.6 for 103864139	bra-r.6 for 103850252	vvi-u.5 for 100264984	ppo-u.5 for 7467074	ppo-u.5 for 7497857	mtr-u.5 for 25502209	ghi-r.1 for 107947182	ghi-r.1 for 107947136	bna-r.1 for 111211052	bna-r.1 for 125586289	bna-r.1 for BNAC06G13920D	sot-r.1 for 102578852	cit-r.1 for 102627756	nta-r.1 for 107764385	nta-r.1 for 107767592	cre-r.1 for CHLRE_02g074100v5

Ortholog

Ortholog ID: 8635

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC4327776

uncharacterized LOC123069402

uncharacterized LOC123077901

uncharacterized LOC123060826

uncharacterized LOC123443284

uncharacterized LOC100836439

uncharacterized LOC103649536

uncharacterized LOC110433558

uncharacterized protein

uncharacterized LOC100810596

uncharacterized LOC100788535

uncharacterized LOC104648938

uncharacterized LOC103864139

uncharacterized LOC103850252

uncharacterized LOC100264984

uncharacterized LOC7467074

uncharacterized LOC7497857

uncharacterized LOC25502209

uncharacterized LOC107947182

uncharacterized LOC107947136

uncharacterized LOC111211052

uncharacterized LOC125586289

uncharacterized BNAC06G13920D

uncharacterized LOC102578852

uncharacterized LOC102627756

uncharacterized LOC107764385

uncharacterized LOC107767592

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	2
hvu00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	7
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi00710	Carbon fixation by Calvin cycle	3
bdi00195	Photosynthesis	2
bdi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	3
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	4
ath00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	3
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	6
vvi00196	Photosynthesis - antenna proteins	3
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00710	Carbon fixation by Calvin cycle	4
ppo01200	Carbon metabolism	4
ppo00195	Photosynthesis	3
ppo00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	3
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00710	Carbon fixation by Calvin cycle	6
bna01200	Carbon metabolism	6
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	5
sot00010	Glycolysis / Gluconeogenesis	2
sot00710	Carbon fixation by Calvin cycle	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	6
cit01200	Carbon metabolism	4
cit00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta00480	Glutathione metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	3
cre00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
cre01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

4327776

123069402

123077901

123060826

123443284

100836439

103649536

110433558

834212

100810596

100788535

104648938

103864139

103850252

100264984

7467074

7497857

25502209

107947182

107947136

111211052

125586289

106366721

102578852

102627756

107764385

107767592

5727172

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4327776 (osa-u.5 coexpression data)

Top 50 enrichment test to 4327776 (osa-u.5 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	1	1	1	2	1	2	1	2	1	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4327776 (osa-u.5 coexpression data)

Top 50 enrichment test to 4327776 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**