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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4328996   RNA-binding protein Raly 
 osa-r.6   4328996   RNA-binding protein Raly 
 osa-m.8   4328996   RNA-binding protein Raly 
 osa-e.1   4328996   RNA-binding protein Raly 
 osa-u.5   4328331   protein YELLOW LEAF 1, choloroplastic-like 
 osa-u.5   4340927   protein FERTILITY RESTORER RF2, mitochondrial 
 tae-r.2   123102017   protein FERTILITY RESTORER RF2, mitochondrial 
 tae-r.2   123119144   protein FERTILITY RESTORER RF2, mitochondrial 
 tae-r.2   123130385   protein YELLOW LEAF 1, choloroplastic 
 hvu-r.1   123395392   protein FERTILITY RESTORER RF2, mitochondrial-like 
 hvu-r.1   123402064   protein YELLOW LEAF 1, choloroplastic-like 
 bdi-r.1   100830527   uncharacterized LOC100830527 
 bdi-r.1   100827196   uncharacterized LOC100827196 
 bdi-r.1   100823286   uncharacterized LOC100823286 
 zma-u.5   100274890   uncharacterized LOC100274890 
 zma-u.5   100304071   uncharacterized LOC100304071 
 sbi-r.1   8069985   transcription factor Sp8 
 sbi-r.1   110435142   uncharacterized LOC110435142 

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Top 50 coexpressed genes to 4328996 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4328996 (osa-u.5 coexpression data)

CoexMap"4328996"


osaLOC4328996 | Entrez gene ID : 4328996      
Species osa tae hvu bdi zma sbi sot vvi sly nta bna ppo cre mtr ath gma bra ghi cit
Paralog 6 3 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010027 [list] [network] thylakoid membrane organization  (13 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (65 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (655 genes)  IEA  
GO MF
Protein NP_001403432.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001403432.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001403432.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4328996
osa-r.6
for
4328996
osa-m.8
for
4328996
osa-e.1
for
4328996
osa-u.5
for
4328331
osa-u.5
for
4340927
tae-r.2
for
123102017
tae-r.2
for
123119144
tae-r.2
for
123130385
hvu-r.1
for
123395392
hvu-r.1
for
123402064
bdi-r.1
for
100830527
bdi-r.1
for
100827196
bdi-r.1
for
100823286
zma-u.5
for
100274890
zma-u.5
for
100304071
sbi-r.1
for
8069985
sbi-r.1
for
110435142


Ortholog ID: 12723
Species osa osa osa tae tae tae hvu hvu bdi bdi bdi zma zma sbi sbi
Symbol LOC4328996 LOC4328331 LOC4340927 LOC123102017 LOC123119144 LOC123130385 LOC123395392 LOC123402064 LOC100830527 LOC100827196 LOC100823286 LOC100274890 LOC100304071 LOC8069985 LOC110435142
Function* RNA-binding protein Raly protein YELLOW LEAF 1, choloroplastic-like protein FERTILITY RESTORER RF2, mitochondrial protein FERTILITY RESTORER RF2, mitochondrial protein FERTILITY RESTORER RF2, mitochondrial protein YELLOW LEAF 1, choloroplastic protein FERTILITY RESTORER RF2, mitochondrial-like protein YELLOW LEAF 1, choloroplastic-like uncharacterized LOC100830527 uncharacterized LOC100827196 uncharacterized LOC100823286 uncharacterized LOC100274890 uncharacterized LOC100304071 transcription factor Sp8 uncharacterized LOC110435142
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa04120 Ubiquitin mediated proteolysis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4328996 4328331 4340927 123102017 123119144 123130385 123395392 123402064 100830527 100827196 100823286 100274890 100304071 8069985 110435142
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