ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4331003	protein NCA1
osa-r.6	4331003	protein NCA1
osa-m.8	4331003	protein NCA1
osa-e.1	4331003	protein NCA1
osa-u.5	4326292	protein NCA1
zma-u.5	100272990	uncharacterized LOC100272990
ath-u.5	AT3G54360	zinc ion binding protein
gma-u.5	100813844	protein NCA1
gma-u.5	100813258	protein NCA1
sly-u.5	101263558	catalase chaperon NCA1-like
vvi-u.5	100262520	protein NCA1
ppo-u.5	7476807	protein NCA1
ppo-u.5	7461326	protein NCA1
mtr-u.5	25488536	protein NCA1

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(501 genes)

IEA

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity	(229 genes)	IEA
GO:0005515 [list] [network] protein binding	(4590 genes)	IEA

Protein

XP_015627027.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, nucl_plas 3, cyto 1, mito 1, pero 1, cyto_pero 1

(predict for XP_015627027.1)

Subcellular
localization
TargetP

chlo 4, other 4

(predict for XP_015627027.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4331003	osa-r.6 for 4331003	osa-m.8 for 4331003	osa-e.1 for 4331003	osa-u.5 for 4326292	zma-u.5 for 100272990	ath-u.5 for AT3G54360	gma-u.5 for 100813844	gma-u.5 for 100813258	sly-u.5 for 101263558	vvi-u.5 for 100262520	ppo-u.5 for 7476807	ppo-u.5 for 7461326	mtr-u.5 for 25488536

Ortholog ID: 6903

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

protein NCA1

uncharacterized LOC100272990

E3 ubiquitin-protein ligase CHFR

uncharacterized LOC110433960

zinc ion binding protein

protein NCA1

catalase chaperon NCA1-like

protein NCA1

uncharacterized LOC102597556

protein NCA1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	2
osa00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00785	Lipoic acid metabolism	3
tae01240	Biosynthesis of cofactors	3
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00785	Lipoic acid metabolism	3
tae01240	Biosynthesis of cofactors	3
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04146	Peroxisome	2
bdi00500	Starch and sucrose metabolism	2
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00900	Terpenoid backbone biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi00900	Terpenoid backbone biosynthesis	2
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	6
sbi01210	2-Oxocarboxylic acid metabolism	4
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3
sbi00220	Arginine biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00071	Fatty acid degradation	4
ath00592	alpha-Linolenic acid metabolism	3
ath01212	Fatty acid metabolism	3
ath00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	3
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	2
bna00760	Nicotinate and nicotinamide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	2
bna00760	Nicotinate and nicotinamide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	4

Expression

Expression pattern

Entrez Gene ID^*

4326292

4331003

123077186

123060176

123442715

100832811

100836228

100272990

8064367

110433960

824603

100813844

100813258

101263558

103841350

103829975

100262520

7476807

7461326

25488536

121218608

107915581

106415522

106415528

102597556

102626165

107782443

107787735

66052844

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4331003 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331003 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4331003 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331003 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**