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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4333188   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 osa-r.6   4333188   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 osa-m.8   4333188   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 osa-e.1   4333188   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 zma-u.5   103629962   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 gma-u.5   102663822   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 gma-u.5   100819993   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 sly-u.5   101267227   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 vvi-u.5   100242007   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 
 mtr-u.5   25489739   pentatricopeptide repeat-containing protein At1g43980, mitochondrial 

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Top 50 coexpressed genes to 4333188 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4333188 (osa-u.5 coexpression data)

CoexMap"4333188"


osaLOC4333188 | Entrez gene ID : 4333188    
Species osa zma gma sly vvi mtr tae hvu ath ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 4 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_025879928.1 [sequence] [blastp]
XP_025879929.1 [sequence] [blastp]
XP_066164878.1 [sequence] [blastp]
XP_066164879.1 [sequence] [blastp]
XP_066164880.1 [sequence] [blastp]
XP_066164881.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  vacu 1  (predict for XP_025879928.1)
chlo 9,  mito 1,  vacu 1  (predict for XP_025879929.1)
chlo 9,  mito 1,  vacu 1  (predict for XP_066164878.1)
chlo 9,  mito 1,  vacu 1  (predict for XP_066164879.1)
chlo 9,  mito 1,  vacu 1  (predict for XP_066164880.1)
chlo 9,  mito 1,  vacu 1  (predict for XP_066164881.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_025879928.1)
scret 2  (predict for XP_025879929.1)
scret 2  (predict for XP_066164878.1)
scret 2  (predict for XP_066164879.1)
scret 2  (predict for XP_066164880.1)
scret 2  (predict for XP_066164881.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4333188

.
osa-r.6
for
4333188

.
osa-m.8
for
4333188

.
osa-e.1
for
4333188

.
zma-u.5
for
103629962

.
gma-u.5
for
102663822

.
gma-u.5
for
100819993

.
sly-u.5
for
101267227

.
vvi-u.5
for
100242007

.
mtr-u.5
for
25489739

.


Ortholog ID: 11497
Species gma gma sly osa zma vvi mtr hvu ghi ghi sot cit bdi nta nta
Symbol LOC100819993 LOC102663822 LOC101267227 LOC4333188 LOC103629962 LOC100242007 LOC25489739 LOC123441955 LOC107951461 LOC107910397 LOC102581120 LOC102608505 LOC100846475 LOC107812378 LOC107786010
Function* pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00220 Arginine biosynthesis 2
hvu00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819993 102663822 101267227 4333188 103629962 100242007 25489739 123441955 107951461 107910397 102581120 102608505 100846475 107812378 107786010
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