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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4333608  membrin-11 
 osa-r.6  4333608  membrin-11 
 osa-m.8  4333608  membrin-11 
 osa-e.1  4333608  membrin-11 
 zma-u.5  100283881  uncharacterized LOC100283881 
 ath-u.5  MEMB11  membrin 11 
 ath-u.5  MEMB12  membrin 12 
 gma-u.5  100803902  membrin-11-like 
 gma-u.5  100780765  membrin-11 
 sly-u.5  101256196  membrin-11 
 vvi-u.5  100258748  membrin-11 
 ppo-u.5  112323812  membrin-11 
 mtr-u.5  25490571  membrin-11 
 mtr-u.5  11431482  membrin-11 

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Top 50 coexpressed genes to 4333608 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4333608 (osa-u.5 coexpression data)

CoexMap"4333608"


osaLOC4333608 | Entrez gene ID : 4333608
Species osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa04130 [list] [network] SNARE interactions in vesicular transport (46 genes)
GO BP
GO:0006906 [list] [network] vesicle fusion  (40 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (471 genes)  IEA  
GO CC
GO:0031902 [list] [network] late endosome membrane  (10 genes)  IEA  
GO:0012507 [list] [network] ER to Golgi transport vesicle membrane  (30 genes)  IEA  
GO:0031201 [list] [network] SNARE complex  (43 genes)  IEA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (223 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (532 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (41 genes)  IEA  
GO:0000149 [list] [network] SNARE binding  (64 genes)  IEA  
Protein XP_015633085.1 [sequence] [blastp]
Subcellular
localization
wolf
golg 3,  plas 1,  chlo 1,  nucl 1,  vacu 1,  E.R._plas 1  (predict for XP_015633085.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_015633085.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4333608

.

osa-r.6
for
4333608

.

osa-m.8
for
4333608

.

osa-e.1
for
4333608

.

zma-u.5
for
100283881

.

ath-u.5
for
MEMB11

.

ath-u.5
for
MEMB12

.

gma-u.5
for
100803902

.

gma-u.5
for
100780765

.

sly-u.5
for
101256196

.

vvi-u.5
for
100258748

.

ppo-u.5
for
112323812

.

mtr-u.5
for
25490571

.

mtr-u.5
for
11431482

.


Ortholog ID: 7950
Species ath ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol MEMB12 MEMB11 LOC100803902 LOC100780765 LOC101256196 LOC4333608 LOC100283881 LOC103867243 LOC100258748 LOC112323812 LOC11431482 LOC25490571 LOC123087368 LOC123095607 LOC123446900 LOC121223094 LOC121209840 LOC106454696 LOC106378466 CHLRE_12g554200v5 LOC8057218 LOC102590730 LOC102593746 LOC102609665 LOC100836304 LOC107778968 LOC107784388
Function* membrin 12 membrin 11 membrin-11-like membrin-11 membrin-11 membrin-11 uncharacterized LOC100283881 membrin-12 membrin-11 membrin-11 membrin-11 membrin-11 membrin-11 membrin-11 membrin-11-like membrin-11 membrin-11 membrin-11 membrin-11 uncharacterized protein membrin-11 membrin-11-like membrin-11-like membrin-11 membrin-11 membrin-11 membrin-11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04142 Lysosome 2
sly00020 Citrate cycle (TCA cycle) 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
osa04144 Endocytosis 2
osa04145 Phagosome 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 14
ppo04145 Phagosome 4
ppo03060 Protein export 3
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 5
tae04144 Endocytosis 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00240 Pyrimidine metabolism 3
bna01232 Nucleotide metabolism 3
bna04141 Protein processing in endoplasmic reticulum 2
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 10
cre03060 Protein export 4
cre04145 Phagosome 4
cre00541 Biosynthesis of various nucleotide sugars 2
cre01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835112 818264 100803902 100780765 101256196 4333608 100283881 103867243 100258748 112323812 11431482 25490571 123087368 123095607 123446900 121223094 121209840 106454696 106378466 5719713 8057218 102590730 102593746 102609665 100836304 107778968 107784388
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