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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4334895   eukaryotic translation initiation factor 3 subunit M 
 osa-r.6   4334895   eukaryotic translation initiation factor 3 subunit M 
 osa-m.8   4334895   eukaryotic translation initiation factor 3 subunit M 
 osa-e.1   4334895   eukaryotic translation initiation factor 3 subunit M 
 zma-u.5   100282333   uncharacterized LOC100282333 
 ath-u.5   AT3G02200   Proteasome component (PCI) domain protein 
 ath-u.5   AT5G15610   Proteasome component (PCI) domain protein 
 gma-u.5   100788645   eukaryotic translation initiation factor 3 subunit M-like 
 gma-u.5   100786194   eukaryotic translation initiation factor 3 subunit M-like 
 gma-u.5   100811263   eukaryotic translation initiation factor 3 subunit M 
 sly-u.5   101255548   uncharacterized LOC101255548 
 vvi-u.5   100251424   uncharacterized LOC100251424 
 ppo-u.5   18097693   uncharacterized LOC18097693 
 ppo-u.5   7484580   uncharacterized LOC7484580 
 mtr-u.5   25499014   eukaryotic translation initiation factor 3 subunit M 
 mtr-u.5   25495361   eukaryotic translation initiation factor 3 subunit M 

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Top 50 coexpressed genes to 4334895 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334895 (osa-u.5 coexpression data)

CoexMap"4334895"


osaLOC4334895 | Entrez gene ID : 4334895      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 3 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002183 [list] [network] cytoplasmic translational initiation  (14 genes)  IEA  
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (20 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (60 genes)  IEA  
Protein NP_001405971.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  extr 1,  vacu 1,  golg 1,  chlo_mito 1  (predict for NP_001405971.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001405971.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4334895
osa-r.6
for
4334895
osa-m.8
for
4334895
osa-e.1
for
4334895
zma-u.5
for
100282333
ath-u.5
for
AT3G02200
ath-u.5
for
AT5G15610
gma-u.5
for
100788645
gma-u.5
for
100786194
gma-u.5
for
100811263
sly-u.5
for
101255548
vvi-u.5
for
100251424
ppo-u.5
for
18097693
ppo-u.5
for
7484580
mtr-u.5
for
25499014
mtr-u.5
for
25495361


Ortholog ID: 3578
Species osa tae tae hvu bdi zma sbi ath ath gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4334895 LOC123142484 LOC123080796 LOC123424423 LOC100840385 LOC100282333 LOC8068627 AT3G02200 AT5G15610 LOC100786194 LOC100788645 LOC101255548 LOC103858947 LOC108868761 LOC100251424 LOC18097693 LOC7484580 LOC25495361 LOC25499014 LOC107939130 LOC107937165 LOC106438921 LOC106382873 LOC102578354 LOC102613977 LOC107815465 LOC107801165 CHLRE_09g417200v5
Function* eukaryotic translation initiation factor 3 subunit M uncharacterized LOC123142484 eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M uncharacterized LOC100282333 eukaryotic translation initiation factor 3 subunit M Proteasome component (PCI) domain protein Proteasome component (PCI) domain protein eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M-like uncharacterized LOC101255548 eukaryotic translation initiation factor 3 subunit M F-box protein At4g22390 uncharacterized LOC100251424 uncharacterized LOC18097693 uncharacterized LOC7484580 eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M-like uncharacterized LOC102613977 uncharacterized LOC107815465 uncharacterized LOC107801165 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03420 Nucleotide excision repair 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 8
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03420 Nucleotide excision repair 3
nta03020 RNA polymerase 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334895 123142484 123080796 123424423 100840385 100282333 8068627 821267 831413 100786194 100788645 101255548 103858947 108868761 100251424 18097693 7484580 25495361 25499014 107939130 107937165 106438921 106382873 102578354 102613977 107815465 107801165 5722405
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