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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4338005   30S ribosomal protein S31, chloroplastic 
 osa-r.6   4338005   30S ribosomal protein S31, chloroplastic 
 osa-m.8   4338005   30S ribosomal protein S31, chloroplastic 
 osa-e.1   4338005   30S ribosomal protein S31, chloroplastic 
 zma-u.5   100282000   30S ribosomal protein S31, chloroplastic-like 
 ath-u.5   PSRP4   plastid-specific ribosomal protein 4 
 gma-u.5   100805197   30S ribosomal protein S31, chloroplastic-like 
 gma-u.5   100783058   30S ribosomal protein S31, chloroplastic 
 sly-u.5   101254999   small ribosomal subunit protein bTHXc 
 vvi-u.5   100258002   30S ribosomal protein S31, chloroplastic 
 ppo-u.5   7487463   30S ribosomal protein S31, chloroplastic 
 mtr-u.5   11417893   30S ribosomal protein S31, chloroplastic 

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Top 50 coexpressed genes to 4338005 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4338005 (osa-u.5 coexpression data)

CoexMap"4338005"


osaLOC4338005 | Entrez gene ID : 4338005    
Species osa zma ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03010 [list] [network] Ribosome (386 genes)
GO BP
GO:0032544 [list] [network] plastid translation  (6 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (360 genes)  IEA  
GO:0009536 [list] [network] plastid  (669 genes)  IEA  
GO MF
Protein NP_001407162.1 [sequence] [blastp]
NP_001407163.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for NP_001407162.1)
chlo 9,  mito 1  (predict for NP_001407163.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001407162.1)
chlo 4  (predict for NP_001407163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4338005

.
osa-r.6
for
4338005

.
osa-m.8
for
4338005

.
osa-e.1
for
4338005

.
zma-u.5
for
100282000

.
ath-u.5
for
PSRP4

.
gma-u.5
for
100805197

.
gma-u.5
for
100783058

.
sly-u.5
for
101254999

.
vvi-u.5
for
100258002

.
ppo-u.5
for
7487463

.
mtr-u.5
for
11417893

.


Ortholog ID: 9426
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol PSRP4 LOC100805197 LOC100783058 LOC101254999 LOC4338005 LOC100282000 LOC103867133 LOC100258002 LOC7487463 LOC11417893 LOC123161610 LOC123168886 LOC123411282 LOC107958049 LOC107891562 LOC106429318 LOC111215556 LOC8056134 LOC102586850 LOC102619516 LOC100830295 LOC107794053
Function* plastid-specific ribosomal protein 4 30S ribosomal protein S31, chloroplastic-like 30S ribosomal protein S31, chloroplastic small ribosomal subunit protein bTHXc 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic-like 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic-like 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic 30S ribosomal protein S31, chloroplastic small ribosomal subunit protein bTHXc-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818392 100805197 100783058 101254999 4338005 100282000 103867133 100258002 7487463 11417893 123161610 123168886 123411282 107958049 107891562 106429318 111215556 8056134 102586850 102619516 100830295 107794053
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