ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-m.8	4340560	amino acid permease 8
osa-u.5	4336246	amino acid permease 3
osa-u.5	9266325	uncharacterized LOC9266325
osa-u.5	4324999	amino acid permease 4
zma-u.5	100383966	uncharacterized LOC100383966
zma-u.5	100382310	uncharacterized LOC100382310
zma-u.5	100282656	amino acid carrier
ath-u.5	AAP3	amino acid permease 3
ath-u.5	AAP2	amino acid permease 2
ath-u.5	AAP4	amino acid permease 4
gma-u.5	100792389	amino acid permease 3
gma-u.5	100775662	amino acid permease 3
sly-u.5	AAP3	amino acid transporter
sly-u.5	AAP2	amino acid transporter
vvi-u.5	100262657	amino acid permease 3
vvi-u.5	100262462	amino acid permease 3
ppo-u.5	7469170	amino acid permease 3
ppo-u.5	7467865	amino acid permease 3
ppo-u.5	7466875	amino acid permease 4
mtr-u.5	11442420	amino acid permease 3
mtr-u.5	25492773	amino acid permease 4
mtr-u.5	25489694	amino acid permease 3

Annotation

functional annotation

KEGG

GO BP

GO:0003333 [list] [network] amino acid transmembrane transport

(64 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3446 genes)

IEA

GO MF

GO:0015171 [list] [network] amino acid transmembrane transporter activity

(83 genes)

IEA

Protein

XP_015642634.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, nucl 2, chlo 1, extr 1, E.R. 1

(predict for XP_015642634.1)

Subcellular
localization
TargetP

other 4

(predict for XP_015642634.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4340560	osa-u.5 for 4336246	osa-u.5 for 9266325	osa-u.5 for 4324999	zma-u.5 for 100383966	zma-u.5 for 100382310	zma-u.5 for 100282656	ath-u.5 for AAP3	ath-u.5 for AAP2	ath-u.5 for AAP4	gma-u.5 for 100792389	gma-u.5 for 100775662	sly-u.5 for AAP3	sly-u.5 for AAP2	vvi-u.5 for 100262657	vvi-u.5 for 100262462	ppo-u.5 for 7469170	ppo-u.5 for 7467865	ppo-u.5 for 7466875	mtr-u.5 for 11442420	mtr-u.5 for 25492773	mtr-u.5 for 25489694

Ortholog

Ortholog ID: 464

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

AAP3

AAP5

LOC100779552

LOC100792389

AAP3

AAP2

Function^*

amino acid permease 3

amino acid permease 3-like

amino acid permease 4-like

amino acid permease 3

amino acid permease 4

amino acid permease 3

amino acid permease 5

amino acid permease 4

amino acid permease 3

amino acid transporter

amino acid permease 4

amino acid permease 2

amino acid permease 3

amino acid permease 4

amino acid permease 2

amino acid permease 3-like

amino acid permease 2

amino acid permease 3

amino acid permease 6-like

amino acid permease 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00330	Arginine and proline metabolism	2
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2
osa00230	Purine metabolism	2
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3
hvu00520	Amino sugar and nucleotide sugar metabolism	3
hvu01250	Biosynthesis of nucleotide sugars	3
hvu00040	Pentose and glucuronate interconversions	2
hvu00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	6
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	8
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

4349989

4327987

123182085

123056652

123427091

123443009

100824189

100822950

103653395

103640852

8075528

8073238

844074

841013

100779552

100792389

543528

544207

103873802

103847193

100262657

18096200

18096205

25489692

25489693

121217850

107960393

106351886

106384945

102582530

102598714

102611511

102625596

142163485

107788618

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4340560 (osa-m.8 coexpression data)

Top 50 enrichment test to 4340560 (osa-m.8 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	3	2	2	2	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4340560 (osa-m.8 coexpression data)

Top 50 enrichment test to 4340560 (osa-m.8 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**