ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4349805	uncharacterized protein At1g76070
osa-r.6	4349805	uncharacterized protein At1g76070
osa-m.8	4349805	uncharacterized protein At1g76070
osa-e.1	4349805	uncharacterized protein At1g76070
osa-u.5	4351532	uncharacterized LOC4351532
osa-u.5	4324737	uncharacterized LOC4324737
tae-r.2	123091505	uncharacterized protein At1g76070
tae-r.2	123071503	uncharacterized LOC123071503
tae-r.2	123062685	uncharacterized LOC123062685
hvu-r.1	123448051	uncharacterized protein At1g76070-like
hvu-r.1	123440500	uncharacterized LOC123440500
hvu-r.1	123395986	uncharacterized LOC123395986
bdi-r.1	100845425	uncharacterized LOC100845425
bdi-r.1	100842321	putative histone-lysine N-methyltransferase PRDM6
zma-u.5	103636456	uncharacterized LOC103636456
zma-u.5	100278201	uncharacterized LOC100278201
zma-u.5	100278164	uncharacterized LOC100278164
sbi-r.1	8070638	uncharacterized LOC8070638
ath-u.5	AT2G36220	uncharacterized protein
gma-u.5	100797951	uncharacterized LOC100797951
gma-u.5	100802723	uncharacterized LOC100802723
gma-u.5	100795534	uncharacterized LOC100795534
sly-u.5	Ty-6	disease resistance protein Ty-6
sly-u.5	101266780	uncharacterized LOC101266780
sly-u.5	101254416	uncharacterized LOC101254416
bra-r.6	103865526	uncharacterized LOC103865526
bra-r.6	103841199	uncharacterized LOC103841199
bra-r.6	103867303	uncharacterized LOC103867303
vvi-u.5	100244210	uncharacterized LOC100244210
ppo-u.5	7467578	uncharacterized LOC7467578
ppo-u.5	7492254	uncharacterized LOC7492254
mtr-u.5	25499396	uncharacterized LOC25499396
mtr-u.5	25483815	uncharacterized LOC25483815
ghi-r.1	107948296	uncharacterized LOC107948296
ghi-r.1	107928230	uncharacterized LOC107928230
ghi-r.1	107908696	uncharacterized LOC107908696
bna-r.1	125599964	uncharacterized LOC125599964
bna-r.1	106364911	uncharacterized LOC106364911
bna-r.1	106364867	uncharacterized LOC106364867
sot-r.1	107059475	uncharacterized LOC107059475
sot-r.1	107061365	uncharacterized LOC107061365
cit-r.1	102620731	uncharacterized LOC102620731
nta-r.1	107824755	uncharacterized LOC107824755
nta-r.1	107823947	uncharacterized LOC107823947
nta-r.1	107823672	uncharacterized LOC107823672

Top 50 coexpressed genes to 4349805 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4349805 (osa-u.5 coexpression data)

CoexMap"4349805"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015615653.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, nucl 3, chlo_mito 3

(predict for XP_015615653.1)

Subcellular
localization
TargetP

other 9

(predict for XP_015615653.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4349805	osa-r.6 for 4349805	osa-m.8 for 4349805	osa-e.1 for 4349805	osa-u.5 for 4351532	osa-u.5 for 4324737	tae-r.2 for 123091505	tae-r.2 for 123071503	tae-r.2 for 123062685	hvu-r.1 for 123448051	hvu-r.1 for 123440500	hvu-r.1 for 123395986	bdi-r.1 for 100845425	bdi-r.1 for 100842321	zma-u.5 for 103636456	zma-u.5 for 100278201	zma-u.5 for 100278164	sbi-r.1 for 8070638	ath-u.5 for AT2G36220	gma-u.5 for 100797951	gma-u.5 for 100802723	gma-u.5 for 100795534	sly-u.5 for Ty-6	sly-u.5 for 101266780	sly-u.5 for 101254416	bra-r.6 for 103865526	bra-r.6 for 103841199	bra-r.6 for 103867303	vvi-u.5 for 100244210	ppo-u.5 for 7467578	ppo-u.5 for 7492254	mtr-u.5 for 25499396	mtr-u.5 for 25483815	ghi-r.1 for 107948296	ghi-r.1 for 107928230	ghi-r.1 for 107908696	bna-r.1 for 125599964	bna-r.1 for 106364911	bna-r.1 for 106364867	sot-r.1 for 107059475	sot-r.1 for 107061365	cit-r.1 for 102620731	nta-r.1 for 107824755	nta-r.1 for 107823947	nta-r.1 for 107823672

Ortholog

Ortholog ID: 1841

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Ty-6

Function^*

uncharacterized protein At1g76070

uncharacterized LOC4351532

uncharacterized LOC4324737

uncharacterized protein At1g76070

uncharacterized LOC123071503

uncharacterized protein At1g76070-like

uncharacterized LOC123440500

uncharacterized LOC123395986

uncharacterized LOC100845425

putative histone-lysine N-methyltransferase PRDM6

uncharacterized LOC100278164

uncharacterized LOC100277552

uncharacterized LOC103651693

uncharacterized LOC8066975

uncharacterized protein

uncharacterized LOC100802723

uncharacterized LOC100795534

uncharacterized LOC121174130

disease resistance protein Ty-6

uncharacterized LOC101266780

uncharacterized LOC101254416

uncharacterized LOC103865526

uncharacterized LOC103841199

uncharacterized LOC103867303

uncharacterized LOC100244210

uncharacterized LOC7467578

uncharacterized LOC7492254

uncharacterized LOC25499396

uncharacterized LOC25483815

uncharacterized LOC107948296

uncharacterized LOC107908696

uncharacterized LOC107896347

uncharacterized LOC125609288

uncharacterized LOC106450209

uncharacterized LOC106450211

uncharacterized LOC107059475

uncharacterized LOC107061365

uncharacterized LOC102620731

uncharacterized LOC107824755

uncharacterized LOC107823947

uncharacterized LOC107823672

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2
osa00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00543	Exopolysaccharide biosynthesis	3
tae00920	Sulfur metabolism	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00944	Flavone and flavonol biosynthesis	2
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	4
sly00541	Biosynthesis of various nucleotide sugars	3
sly01250	Biosynthesis of nucleotide sugars	3
sly00040	Pentose and glucuronate interconversions	2
sly00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00541	Biosynthesis of various nucleotide sugars	2
sly01250	Biosynthesis of nucleotide sugars	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00380	Tryptophan metabolism	4
ghi00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00480	Glutathione metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04626	Plant-pathogen interaction	3
sot00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	4
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta01240	Biosynthesis of cofactors	4
nta01250	Biosynthesis of nucleotide sugars	4
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	8
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

4349805

4351532

4324737

123091505

123071503

123448051

123440500

123395986

100845425

100842321

100278164

100277552

103651693

8066975

818194

100802723

100795534

121174130

101257619

101266780

101254416

103865526

103841199

103867303

100244210

7467578

7492254

25499396

25483815

107948296

107908696

107896347

125609288

106450209

106450211

107059475

107061365

102620731

107824755

107823947

107823672

The preparation time of this page was 0.5 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	3	2	3	1	1	3	3	3	1	2	2	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4349805 (osa-u.5 coexpression data)

Top 50 enrichment test to 4349805 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**