Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4350206   polygalacturonase 
 osa-r.6   4350206   polygalacturonase 
 osa-u.5   4350207   polygalacturonase 
 ath-u.5   AT3G59850   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G65570   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G05660   Pectin lyase-like superfamily protein 
 sly-u.5   101264897   polygalacturonase-like 
 mtr-u.5   120577097   polygalacturonase 

close


Top 50 coexpressed genes to 4350206 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4350206 (osa-u.5 coexpression data)

CoexMap"4350206"


osaLOC4350206 | Entrez gene ID : 4350206    
Species osa ath sly mtr bdi hvu bra vvi cit gma bna ppo sbi ghi sot nta cre tae zma
Paralog 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00040 [list] [network] Pentose and glucuronate interconversions (76 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (757 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (43 genes)  IEA  
Protein XP_015615972.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 5,  chlo 3,  vacu 1  (predict for XP_015615972.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_015615972.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4350206
osa-r.6
for
4350206
osa-u.5
for
4350207
ath-u.5
for
AT3G59850
ath-u.5
for
AT1G65570
ath-u.5
for
AT1G05660
sly-u.5
for
101264897
mtr-u.5
for
120577097


Ortholog ID: 208
Species osa tae ath gma sly cit
Symbol LOC4350206 LOC123091200 AT2G43870 LOC100785701 LOC101264897 LOC102618118
Function* polygalacturonase polygalacturonase Pectin lyase-like superfamily protein polygalacturonase polygalacturonase-like polygalacturonase-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
ath04075 Plant hormone signal transduction 2
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma00040 Pentose and glucuronate interconversions 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4350206 123091200 818991 100785701 101264897 102618118
The preparation time of this page was 0.1 [sec].