Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4351682   histone deacetylase 10, chloroplastic-like 
 osa-r.6   4351682   histone deacetylase 10, chloroplastic-like 
 osa-m.8   4351682   histone deacetylase 10, chloroplastic-like 
 osa-e.1   4351682   histone deacetylase 10, chloroplastic-like 
 zma-u.5   101027153   histone deacetylase 10 
 ath-u.5   HDA14   histone deacetylase 14 
 gma-u.5   HDA8   histone deacetylase 
 sly-u.5   101251499   histone deacetylase 14, chloroplastic 
 vvi-u.5   100244854   histone deacetylase-like 
 ppo-u.5   7479143   histone deacetylase 14, chloroplastic 
 mtr-u.5   11442399   histone deacetylase 14 

close


Top 50 coexpressed genes to 4351682 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4351682 (osa-u.5 coexpression data)

CoexMap"4351682"


osaLOC4351682 | Entrez gene ID : 4351682      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (16 genes)  IEA  
GO CC
GO:0000118 [list] [network] histone deacetylase complex  (29 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (14 genes)  IEA  
GO:0008134 [list] [network] transcription factor binding  (24 genes)  IEA  
Protein XP_015618357.1 [sequence] [blastp]
XP_015618358.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for XP_015618357.1)
mito 5,  chlo 4  (predict for XP_015618358.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_015618357.1)
mito 8  (predict for XP_015618358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4351682
osa-r.6
for
4351682
osa-m.8
for
4351682
osa-e.1
for
4351682
zma-u.5
for
101027153
ath-u.5
for
HDA14
gma-u.5
for
HDA8
sly-u.5
for
101251499
vvi-u.5
for
100244854
ppo-u.5
for
7479143
mtr-u.5
for
11442399


Ortholog ID: 10249
Species osa tae tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC4351682 LOC123111077 LOC123120047 LOC123399874 LOC100845854 LOC101027153 LOC8085432 HDA14 HDA8 LOC101251499 LOC103846835 LOC100244854 LOC7479143 LOC11442399 LOC107935785 LOC107959622 LOC106438528 LOC106368730 LOC102589749 LOC102590079 LOC102628763 LOC107801462 LOC107772333 CHLRE_06g290400v5
Function* histone deacetylase 10, chloroplastic-like histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 10 histone deacetylase 14 histone deacetylase 14 histone deacetylase histone deacetylase 14, chloroplastic histone deacetylase 14 histone deacetylase-like histone deacetylase 14, chloroplastic histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14, chloroplastic histone deacetylase 14, chloroplastic histone deacetylase 14 uncharacterized LOC102590079 histone deacetylase 14, chloroplastic histone deacetylase 14, chloroplastic histone deacetylase 14, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae04146 Peroxisome 4
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 9
ghi00860 Porphyrin metabolism 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00860 Porphyrin metabolism 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00360 Phenylalanine metabolism 2
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00360 Phenylalanine metabolism 2
bna00380 Tryptophan metabolism 2
bna00030 Pentose phosphate pathway 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4351682 123111077 123120047 123399874 100845854 101027153 8085432 829484 100788664 101251499 103846835 100244854 7479143 11442399 107935785 107959622 106438528 106368730 102589749 102590079 102628763 107801462 107772333 5721083
The preparation time of this page was 0.1 [sec].