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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   atpI   ATP synthase CF0 A subunit 
 ppo-r.4   atpI   ATP synthase CF0 A subunit 
 gma-u.5   atpI   ATPase IV subunit 
 mtr-u.5   120580090   ATP synthase subunit a, chloroplastic 
 mtr-u.5   atpI   ATP synthase CF0 A subunit 
 ath-u.5   atpI   ATP synthase CF0 A subunit 
 vvi-u.5   atpI   ATPase IV subunit 
 ghi-r.1   121228115   ATP synthase subunit a, chloroplastic 
 ghi-r.1   121205974   ATP synthase subunit a, chloroplastic-like 
 ghi-r.1   atpI   ATPase IV subunit 
 cit-r.1   atpI   ATP synthase CF0 A subunit 
 sly-u.5   atpI   ATP synthase CF0 subunit IV 
 sot-r.1   atpI   ATP synthase CF0 A subunit 
 nta-r.1   atpI   ATPase IV subunit 
 osa-u.5   atpI   ATP synthase CF0 A subunit 
 zma-u.5   118473657   ATP synthase subunit a, chloroplastic-like 
 zma-u.5   118473794   ATP synthase subunit a, chloroplastic-like 
 tae-r.2   123055165   ATP synthase subunit a, chloroplastic 
 tae-r.2   123068902   ATP synthase subunit a, chloroplastic-like 
 sbi-r.1   atpI   ATP synthase CF0 A subunit 
 bdi-r.1   100827337   ATP synthase subunit a, chloroplastic-like 
 bdi-r.1   atpI   ATP synthase CF0 A subunit 

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Top 50 coexpressed genes to atpI (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to atpI (ppo-u.5 coexpression data)

CoexMap"4929641"


ppoatpI | Entrez gene ID : 4929641    
Species ppo gma mtr ath vvi ghi cit sly sot nta osa zma tae sbi bdi bna bra cre hvu
Paralog 2 1 2 1 1 3 1 1 1 1 1 2 2 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00190 [list] [network] Oxidative phosphorylation (178 genes)
pop00195 [list] [network] Photosynthesis (104 genes)
GO BP
GO CC
GO MF
Protein YP_001109487.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  plas 3,  cyto_plas 2,  vacu 1,  golg 1  (predict for YP_001109487.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for YP_001109487.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
atpI
ppo-r.4
for
atpI
gma-u.5
for
atpI
mtr-u.5
for
120580090
mtr-u.5
for
atpI
ath-u.5
for
atpI
vvi-u.5
for
atpI
ghi-r.1
for
121228115
ghi-r.1
for
121205974
ghi-r.1
for
atpI
cit-r.1
for
atpI
sly-u.5
for
atpI
sot-r.1
for
atpI
nta-r.1
for
atpI
osa-u.5
for
atpI
zma-u.5
for
118473657
zma-u.5
for
118473794
tae-r.2
for
123055165
tae-r.2
for
123068902
sbi-r.1
for
atpI
bdi-r.1
for
100827337
bdi-r.1
for
atpI


Ortholog ID: 2000
Species ppo gma mtr mtr ath vvi ghi ghi ghi cit sly sot nta osa zma tae tae sbi bdi bdi
Symbol atpI atpI LOC120580090 atpI atpI atpI LOC121228115 LOC121205974 atpI atpI atpI atpI atpI atpI LOC118473794 LOC123104771 LOC123181326 atpI LOC100827337 atpI
Function* ATP synthase CF0 A subunit ATPase IV subunit ATP synthase subunit a, chloroplastic ATP synthase CF0 A subunit ATP synthase CF0 A subunit ATPase IV subunit ATP synthase subunit a, chloroplastic ATP synthase subunit a, chloroplastic-like ATPase IV subunit ATP synthase CF0 A subunit ATP synthase CF0 subunit IV ATP synthase CF0 A subunit ATPase IV subunit ATP synthase CF0 A subunit ATP synthase subunit a, chloroplastic-like ATP synthase subunit a, chloroplastic ATP synthase subunit a, chloroplastic-like ATP synthase CF0 A subunit ATP synthase subunit a, chloroplastic-like ATP synthase CF0 A subunit
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00195 Photosynthesis 5
ppo00190 Oxidative phosphorylation 5
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 12
gma00195 Photosynthesis 5
gma03020 RNA polymerase 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 8
ath00190 Oxidative phosphorylation 5
ath03020 RNA polymerase 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 8
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
vvi03020 RNA polymerase 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
ghi00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi00195 Photosynthesis 6
ghi03010 Ribosome 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi00195 Photosynthesis 6
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00190 Oxidative phosphorylation 8
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 9
sly00190 Oxidative phosphorylation 6
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 8
sot00195 Photosynthesis 6
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta00195 Photosynthesis 7
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 12
osa00190 Oxidative phosphorylation 7
osa03010 Ribosome 4
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 10
zma00195 Photosynthesis 9
zma03020 RNA polymerase 6
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 13
tae00195 Photosynthesis 11
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 11
tae00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00190 Oxidative phosphorylation 8
sbi03010 Ribosome 2
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 7
bdi00190 Oxidative phosphorylation 5
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4929641 3989295 120580090 5333169 844787 4025095 121228115 121205974 3989193 4271231 3950464 4099857 800497 3131393 118473794 123104771 123181326 4549112 100827337 6439835
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