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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 ppo-r.4   clpP   ATP-dependent Clp protease proteolytic subunit 
 gma-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 mtr-u.5   120580179   ATP-dependent Clp protease proteolytic subunit 
 mtr-u.5   11441954   ATP-dependent Clp protease proteolytic subunit 
 mtr-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 ath-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 vvi-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 sly-u.5   clpP   clp protease proteolytic subunit 
 osa-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 
 zma-u.5   clpP   ATP-dependent Clp protease proteolytic subunit 

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Top 50 coexpressed genes to clpP (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to clpP (ppo-u.5 coexpression data)

CoexMap"4929698"


ppoclpP | Entrez gene ID : 4929698    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 1 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein YP_001109527.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_E.R. 3  (predict for YP_001109527.1)
Subcellular
localization
TargetP
other 8  (predict for YP_001109527.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
clpP

.
ppo-r.4
for
clpP

.
gma-u.5
for
clpP

.
mtr-u.5
for
120580179

.
mtr-u.5
for
11441954

.
mtr-u.5
for
clpP

.
ath-u.5
for
clpP

.
vvi-u.5
for
clpP

.
sly-u.5
for
clpP

.
osa-u.5
for
clpP

.
zma-u.5
for
clpP

.


Ortholog ID: 11813
Species ath gma sly osa zma vvi ppo mtr mtr ghi ghi bna sbi sot cit bdi nta
Symbol clpP clpP clpP clpP clpP clpP clpP LOC11441954 LOC120580179 clpP LOC121220860 clpP clpP clpP clpP clpP clpP
Function* ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03020 RNA polymerase 4
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00195 Photosynthesis 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly00970 Aminoacyl-tRNA biosynthesis 4
sly00190 Oxidative phosphorylation 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03020 RNA polymerase 3
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi03010 Ribosome 4
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 10
ghi00195 Photosynthesis 10
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 12
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot00190 Oxidative phosphorylation 4
sot00195 Photosynthesis 4
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00190 Oxidative phosphorylation 6
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 8
bdi03010 Ribosome 6
bdi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844734 3989322 3950455 3131474 845176 4025124 4929698 11441954 120580179 3989129 121220860 11541989 4549216 4099934 4271124 6439882 800474
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