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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541639   response regulator 10 
 zma-r.6   541639   response regulator 10 
 zma-m.5   541639   response regulator 10 
 zma-u.5   541636   response regulator 8 
 osa-u.5   4332111   two-component response regulator ORR21-like 
 ath-u.5   RR14   response regulator 14 
 gma-u.5   100817125   two-component response regulator ORR21 
 gma-u.5   100804937   two-component response regulator ORR21 
 sly-u.5   101264510   two-component response regulator ARR14 
 vvi-u.5   100250832   two-component response regulator ORR21 
 ppo-u.5   7459182   two-component response regulator ORR21 
 ppo-u.5   7457808   two-component response regulator ORR21 
 mtr-u.5   25482558   two-component response regulator ORR21 

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Top 50 coexpressed genes to 541639 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541639 (zma-u.5 coexpression data)

CoexMap"541639"


zmaLOC541639 | Entrez gene ID : 541639      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04075 [list] [network] Plant hormone signal transduction (537 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (65 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (127 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein NP_001104864.1 [sequence] [blastp]
XP_008659002.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001104864.1)
nucl 8,  cyto 1  (predict for XP_008659002.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001104864.1)
other 7  (predict for XP_008659002.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541639

.
zma-r.6
for
541639

.
zma-m.5
for
541639

.
zma-u.5
for
541636

.
osa-u.5
for
4332111

.
ath-u.5
for
RR14

.
gma-u.5
for
100817125

.
gma-u.5
for
100804937

.
sly-u.5
for
101264510

.
vvi-u.5
for
100250832

.
ppo-u.5
for
7459182

.
ppo-u.5
for
7457808

.
mtr-u.5
for
25482558

.


Ortholog ID: 9371
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol RR14 LOC100804937 LOC100817125 LOC101264510 LOC4332111 LOC541636 LOC541639 LOC103854042 LOC100250832 LOC7457808 LOC7459182 LOC25482558 LOC123085123 LOC100873111 LOC123449267 LOC107910344 LOC107909872 LOC125581974 LOC106432945 LOC8056866 LOC102606335 LOC102606615 LOC100821963 LOC107805246 LOC107814899
Function* response regulator 14 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ARR14 two-component response regulator ORR21-like response regulator 8 response regulator 10 two-component response regulator ARR14 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21-like two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ARR14-like two-component response regulator ARR14 two-component response regulator ORR21 two-component response regulator ARR14 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
gma04075 Plant hormone signal transduction 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly01200 Carbon metabolism 3
sly00620 Pyruvate metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04142 Lysosome 5
tae04145 Phagosome 5
tae04075 Plant hormone signal transduction 3
tae00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 8
tae04142 Lysosome 8
tae04145 Phagosome 8
tae00562 Inositol phosphate metabolism 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814707 100804937 100817125 101264510 4332111 541636 541639 103854042 100250832 7457808 7459182 25482558 123085123 100873111 123449267 107910344 107909872 125581974 106432945 8056866 102606335 102606615 100821963 107805246 107814899
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