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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541788   thylakoid assembly 4 
 zma-r.6   541788   thylakoid assembly 4 
 zma-m.5   541788   thylakoid assembly 4 
 zma-u.5   541789   uncharacterized LOC541789 
 osa-u.5   112936010   sec-independent protein translocase protein TATA, chloroplastic-like 
 ath-u.5   AT5G28750   Bacterial sec-independent translocation protein mttA/Hcf106 
 gma-u.5   100807037   sec-independent protein translocase protein TATA, chloroplastic 
 gma-u.5   100797959   sec-independent protein translocase protein TATA, chloroplastic 
 gma-u.5   100500409   mttA/Hcf106 domain-containing protein 
 sly-u.5   101261162   sec-independent protein translocase protein TATA, chloroplastic 
 bra-r.6   103874592   sec-independent protein translocase protein TATA, chloroplastic 
 bra-r.6   103837301   sec-independent protein translocase protein TATA, chloroplastic 
 vvi-u.5   100250385   sec-independent protein translocase protein TATA, chloroplastic 
 ppo-u.5   18098968   sec-independent protein translocase protein TATA, chloroplastic 
 ppo-u.5   7474607   sec-independent protein translocase protein TATA, chloroplastic 
 mtr-u.5   25499679   sec-independent protein translocase protein TATA, chloroplastic 
 mtr-u.5   25484642   sec-independent protein translocase protein TATA, chloroplastic 
 ghi-r.1   107920281   sec-independent protein translocase protein TATA, chloroplastic 
 ghi-r.1   107893228   sec-independent protein translocase protein TATA, chloroplastic 
 bna-r.1   111200861   sec-independent protein translocase protein TATA, chloroplastic-like 
 bna-r.1   111211534   sec-independent protein translocase protein TATA, chloroplastic-like 
 bna-r.1   106382497   sec-independent protein translocase protein TATA, chloroplastic 
 sot-r.1   102583072   sec-independent protein translocase protein TATA, chloroplastic 
 cit-r.1   102615983   sec-independent protein translocase protein TATA, chloroplastic 
 nta-r.1   107784306   sec-independent protein translocase protein TATA, chloroplastic 
 nta-r.1   107809731   sec-independent protein translocase protein TATA, chloroplastic 
 nta-r.1   107828478   sec-independent protein translocase protein TATA, chloroplastic-like 
 cre-r.1   CHLRE_10g438550v5   uncharacterized protein 

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Top 50 coexpressed genes to 541788 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541788 (zma-u.5 coexpression data)

CoexMap"541788"


zmaLOC541788 | Entrez gene ID : 541788      
Species zma osa ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre tae hvu bdi sbi
Paralog 4 1 1 3 1 2 1 2 2 2 3 1 1 3 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03060 [list] [network] Protein export (81 genes)
GO BP
GO:0043953 [list] [network] protein transport by the Tat complex  (6 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3751 genes)  IEA  
GO MF
Protein NP_001150512.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001150512.2)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001150512.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541788
zma-r.6
for
541788
zma-m.5
for
541788
zma-u.5
for
541789
osa-u.5
for
112936010
ath-u.5
for
AT5G28750
gma-u.5
for
100807037
gma-u.5
for
100797959
gma-u.5
for
100500409
sly-u.5
for
101261162
bra-r.6
for
103874592
bra-r.6
for
103837301
vvi-u.5
for
100250385
ppo-u.5
for
18098968
ppo-u.5
for
7474607
mtr-u.5
for
25499679
mtr-u.5
for
25484642
ghi-r.1
for
107920281
ghi-r.1
for
107893228
bna-r.1
for
111200861
bna-r.1
for
111211534
bna-r.1
for
106382497
sot-r.1
for
102583072
cit-r.1
for
102615983
nta-r.1
for
107784306
nta-r.1
for
107809731
nta-r.1
for
107828478
cre-r.1
for
CHLRE_10g438550v5


Ortholog ID: 8166
Species zma zma osa ath gma gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC541788 LOC541789 LOC112936010 AT5G28750 LOC100807037 LOC100797959 LOC100500409 LOC101261162 LOC103874592 LOC103837301 LOC100250385 LOC18098968 LOC7474607 LOC25499679 LOC25484642 LOC107920281 LOC107893228 LOC111200861 LOC111211534 LOC106348854 LOC102583072 LOC102615983 LOC107784306 LOC107809731 LOC107828478 CHLRE_10g438550v5
Function* thylakoid assembly 4 uncharacterized LOC541789 sec-independent protein translocase protein TATA, chloroplastic-like Bacterial sec-independent translocation protein mttA/Hcf106 sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic mttA/Hcf106 domain-containing protein sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic-like sec-independent protein translocase protein TATA, chloroplastic-like sec-independent protein translocase protein TATA, chloroplastic-like sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic sec-independent protein translocase protein TATA, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 5
gma03010 Ribosome 3
gma01240 Biosynthesis of cofactors 3
gma00860 Porphyrin metabolism 2
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 4
gma00190 Oxidative phosphorylation 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03060 Protein export 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
bna01200 Carbon metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01230 Biosynthesis of amino acids 3
bna00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03060 Protein export 2
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00190 Oxidative phosphorylation 2
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00740 Riboflavin metabolism 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
cre00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 541788 541789 112936010 832987 100807037 100797959 100500409 101261162 103874592 103837301 100250385 18098968 7474607 25499679 25484642 107920281 107893228 111200861 111211534 106348854 102583072 102615983 107784306 107809731 107828478 5715950
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