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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542012   translocon of outer membrane of chloroplast35 
 zma-r.6   542012   translocon of outer membrane of chloroplast35 
 zma-m.5   542012   translocon of outer membrane of chloroplast35 
 zma-u.5   542502   translocon at outer membrane of chloroplast34 
 osa-u.5   4332203   translocase of chloroplast 34, chloroplastic 
 ath-u.5   TOC34   translocon at the outer envelope membrane of chloroplasts 34 
 ath-u.5   TOC33   translocon at the outer envelope membrane of chloroplasts 33 
 gma-u.5   100782594   translocase of chloroplast 34 
 gma-u.5   100787890   translocase of chloroplast 34-like 
 sly-u.5   101267995   translocase of chloroplast 34, chloroplastic 
 sly-u.5   101248855   translocase of chloroplast 34 
 vvi-u.5   100251020   translocase of chloroplast 34, chloroplastic 
 vvi-u.5   100257906   translocase of chloroplast 34, chloroplastic 
 ppo-u.5   7487761   translocase of chloroplast 33, chloroplastic 
 ppo-u.5   7486826   translocase of chloroplast 33, chloroplastic 
 mtr-u.5   11438484   translocase of chloroplast 34 
 mtr-u.5   120579439   translocase of chloroplast 34 

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Top 50 coexpressed genes to 542012 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542012 (zma-u.5 coexpression data)

CoexMap"542012"


zmaLOC542012 | Entrez gene ID : 542012      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006886 [list] [network] intracellular protein transport  (303 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (31 genes)  IEA  
GO MF
GO:0015450 [list] [network] protein-transporting ATPase activity  (2 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (315 genes)  IEA  
Protein NP_001105129.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  golg 2,  cyto_plas 2  (predict for NP_001105129.2)
Subcellular
localization
TargetP
other 4  (predict for NP_001105129.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542012

.
zma-r.6
for
542012

.
zma-m.5
for
542012

.
zma-u.5
for
542502

.
osa-u.5
for
4332203

.
ath-u.5
for
TOC34

.
ath-u.5
for
TOC33

.
gma-u.5
for
100782594

.
gma-u.5
for
100787890

.
sly-u.5
for
101267995

.
sly-u.5
for
101248855

.
vvi-u.5
for
100251020

.
vvi-u.5
for
100257906

.
ppo-u.5
for
7487761

.
ppo-u.5
for
7486826

.
mtr-u.5
for
11438484

.
mtr-u.5
for
120579439

.


Ortholog ID: 4118
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol TOC33 TOC34 LOC100782594 LOC100787890 LOC101267995 LOC101248855 LOC4332203 LOC542502 LOC542012 LOC103847234 LOC103843762 LOC100257906 LOC100251020 LOC7487761 LOC7486826 LOC120579439 LOC11438484 LOC123092820 LOC123085212 LOC123449192 LOC107912266 LOC107924043 LOC106397213 LOC106419283 CHLRE_06g252200v5 LOC110431641 LOC102593389 LOC102585579 LOC102610540 LOC102609876 LOC100826381 LOC107780482 LOC107781341
Function* translocon at the outer envelope membrane of chloroplasts 33 translocon at the outer envelope membrane of chloroplasts 34 translocase of chloroplast 34 translocase of chloroplast 34-like translocase of chloroplast 34, chloroplastic translocase of chloroplast 34 translocase of chloroplast 34, chloroplastic translocon at outer membrane of chloroplast34 translocon of outer membrane of chloroplast35 translocase of chloroplast 34, chloroplastic translocase of chloroplast 33, chloroplastic translocase of chloroplast 34, chloroplastic translocase of chloroplast 34, chloroplastic translocase of chloroplast 33, chloroplastic translocase of chloroplast 33, chloroplastic translocase of chloroplast 34 translocase of chloroplast 34 translocase of chloroplast 34, chloroplastic translocase of chloroplast 34, chloroplastic translocase of chloroplast 34, chloroplastic-like translocase of chloroplast 33, chloroplastic translocase of chloroplast 33, chloroplastic translocase of chloroplast 33, chloroplastic translocase of chloroplast 34, chloroplastic uncharacterized protein translocase of chloroplast 34, chloroplastic-like translocase of chloroplast 34, chloroplastic translocase of chloroplast 34-like translocase of chloroplast 33, chloroplastic translocase of chloroplast 34, chloroplastic translocase of chloroplast 34, chloroplastic translocase of chloroplast 34 translocase of chloroplast 34-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03060 Protein export 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03040 Spliceosome 2
osa04144 Endocytosis 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma00770 Pantothenate and CoA biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr01240 Biosynthesis of cofactors 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot04141 Protein processing in endoplasmic reticulum 2
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot00770 Pantothenate and CoA biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03040 Spliceosome 4
cit04122 Sulfur relay system 2
cit04120 Ubiquitin mediated proteolysis 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839248 830382 100782594 100787890 101267995 101248855 4332203 542502 542012 103847234 103843762 100257906 100251020 7487761 7486826 120579439 11438484 123092820 123085212 123449192 107912266 107924043 106397213 106419283 5722177 110431641 102593389 102585579 102610540 102609876 100826381 107780482 107781341
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