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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542116   superal 1 
 zma-r.6   542116   superal 1 
 zma-m.5   542116   superal 1 
 osa-u.5   4341638   ESCRT-related protein CHMP1-like 
 ath-u.5   VPS46.1   vacuolar protein sorting 46.1 
 ath-u.5   VPS46.2   SNF7 family protein 
 gma-u.5   100792384   ESCRT-related protein CHMP1B 
 gma-u.5   100795747   ESCRT-related protein CHMP1B 
 sly-u.5   101260829   ESCRT-related protein CHMP1A 
 sly-u.5   101247200   ESCRT-related protein CHMP1A 
 vvi-u.5   100256723   charged multivesicular body protein 1-like 
 ppo-u.5   7475124   ESCRT-related protein CHMP1B 
 ppo-u.5   7478182   ESCRT-related protein CHMP1B 
 mtr-u.5   11433436   ESCRT-related protein CHMP1B 

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Top 50 coexpressed genes to 542116 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542116 (zma-u.5 coexpression data)

CoexMap"542116"


zmaLOC542116 | Entrez gene ID : 542116    
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03272 [list] [network] Virion - Hepatitis viruses (15 genes)
zma04144 [list] [network] Endocytosis (208 genes)
GO BP
GO:0007034 [list] [network] vacuolar transport  (74 genes)  IEA  
GO CC
GO MF
Protein NP_001316421.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 3  (predict for NP_001316421.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001316421.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542116
zma-r.6
for
542116
zma-m.5
for
542116
osa-u.5
for
4341638
ath-u.5
for
VPS46.1
ath-u.5
for
VPS46.2
gma-u.5
for
100792384
gma-u.5
for
100795747
sly-u.5
for
101260829
sly-u.5
for
101247200
vvi-u.5
for
100256723
ppo-u.5
for
7475124
ppo-u.5
for
7478182
mtr-u.5
for
11433436


Ortholog ID: 4462
Species zma sbi osa tae tae hvu bdi ath ath gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC542116 LOC8067706 LOC4341638 LOC123156283 LOC123170126 LOC123407802 LOC100830707 VPS46.2 VPS46.1 LOC100792384 LOC100795747 LOC101260829 LOC101247200 LOC103852821 LOC103830769 LOC100256723 LOC7478182 LOC7475124 LOC11433436 LOC107937287 LOC107897361 LOC106406432 LOC106405410 LOC102583560 LOC102596846 LOC102623873 LOC107826467 LOC107832156 CHLRE_03g188500v5
Function* superal 1 ESCRT-related protein CHMP1 ESCRT-related protein CHMP1-like ESCRT-related protein CHMP1 ESCRT-related protein CHMP1 ESCRT-related protein CHMP1 ESCRT-related protein CHMP1 SNF7 family protein vacuolar protein sorting 46.1 ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1A ESCRT-related protein CHMP1A ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B charged multivesicular body protein 1-like ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B-like ESCRT-related protein CHMP1B ESCRT-related protein CHMP1A ESCRT-related protein CHMP1A ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B ESCRT-related protein CHMP1B-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 5
zma04144 Endocytosis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 5
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 5
osa03272 Virion - Hepatitis viruses 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 5
tae03272 Virion - Hepatitis viruses 4
tae04626 Plant-pathogen interaction 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath03272 Virion - Hepatitis viruses 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma04130 SNARE interactions in vesicular transport 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03010 Ribosome 2
gma04130 SNARE interactions in vesicular transport 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
sly04070 Phosphatidylinositol signaling system 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03272 Virion - Hepatitis viruses 3
bra04144 Endocytosis 3
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00030 Pentose phosphate pathway 3
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo03272 Virion - Hepatitis viruses 3
ppo03018 RNA degradation 2
ppo04016 MAPK signaling pathway - plant 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03272 Virion - Hepatitis viruses 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
ghi03272 Virion - Hepatitis viruses 6
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi03272 Virion - Hepatitis viruses 6
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 6
bna04144 Endocytosis 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 6
bna04144 Endocytosis 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit00190 Oxidative phosphorylation 2
cit01200 Carbon metabolism 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542116 8067706 4341638 123156283 123170126 123407802 100830707 843634 838349 100792384 100795747 101260829 101247200 103852821 103830769 100256723 7478182 7475124 11433436 107937287 107897361 106406432 106405410 102583560 102596846 102623873 107826467 107832156 5717486
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