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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542450   Eukaryotic initiation factor-5 
 zma-r.6   542450   Eukaryotic initiation factor-5 
 zma-m.5   542450   Eukaryotic initiation factor-5 
 zma-u.5   100382117   uncharacterized LOC100382117 
 osa-u.5   4346742   eukaryotic translation initiation factor 5 
 osa-u.5   9272123   eukaryotic translation initiation factor 5 
 ath-u.5   AT1G36730   Translation initiation factor IF2/IF5 
 ath-u.5   AT1G77840   Translation initiation factor IF2/IF5 
 gma-u.5   100796565   eukaryotic translation initiation factor 5 
 gma-u.5   100796346   eukaryotic translation initiation factor 5 
 gma-u.5   100792481   eukaryotic translation initiation factor 5 
 sly-u.5   101262596   eukaryotic translation initiation factor 5 
 sly-u.5   101262974   eukaryotic translation initiation factor 5 
 sly-u.5   101262288   eukaryotic translation initiation factor 5 
 vvi-u.5   100263898   eukaryotic translation initiation factor 5 
 vvi-u.5   100262554   eukaryotic translation initiation factor 5 
 ppo-u.5   18099419   eukaryotic translation initiation factor 5 
 ppo-u.5   18097599   eukaryotic translation initiation factor 5 
 ppo-u.5   18097660   eukaryotic translation initiation factor 5 
 mtr-u.5   11427568   eukaryotic translation initiation factor 5 

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Top 50 coexpressed genes to 542450 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542450 (zma-u.5 coexpression data)

CoexMap"542450"


zmaLOC542450 | Entrez gene ID : 542450      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 3 3 2 3 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001732 [list] [network] formation of cytoplasmic translation initiation complex  (4 genes)  IEA  
GO:0006413 [list] [network] translational initiation  (55 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO MF
GO:0071074 [list] [network] eukaryotic initiation factor eIF2 binding  (2 genes)  IEA  
GO:0005092 [list] [network] GDP-dissociation inhibitor activity  (17 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (86 genes)  IEA  
Protein NP_001105478.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  cyto 2,  cysk_nucl 2  (predict for NP_001105478.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001105478.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542450

.
zma-r.6
for
542450

.
zma-m.5
for
542450

.
zma-u.5
for
100382117

.
osa-u.5
for
4346742

.
osa-u.5
for
9272123

.
ath-u.5
for
AT1G36730

.
ath-u.5
for
AT1G77840

.
gma-u.5
for
100796565

.
gma-u.5
for
100796346

.
gma-u.5
for
100792481

.
sly-u.5
for
101262596

.
sly-u.5
for
101262974

.
sly-u.5
for
101262288

.
vvi-u.5
for
100263898

.
vvi-u.5
for
100262554

.
ppo-u.5
for
18099419

.
ppo-u.5
for
18097599

.
ppo-u.5
for
18097660

.
mtr-u.5
for
11427568

.


Ortholog ID: 1892
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol AT1G77840 AT1G36730 LOC100778073 LOC100796565 LOC101262596 LOC101262974 LOC9272123 LOC4346742 LOC100382117 LOC542450 LOC103875083 LOC103848723 LOC100262554 LOC100263898 LOC18097599 LOC18099419 LOC11427568 LOC123138106 LOC123143745 LOC123406361 LOC123404681 LOC107905027 LOC106400294 LOC106353452 CHLRE_06g251600v5 LOC8074633 LOC102586907 LOC102601530 LOC102616026 LOC102606845 LOC100831458 LOC107780869 LOC107800674
Function* Translation initiation factor IF2/IF5 Translation initiation factor IF2/IF5 translation initiation factor IF2/IF5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 uncharacterized LOC100382117 Eukaryotic initiation factor-5 probable eukaryotic translation initiation factor 5-2 probable eukaryotic translation initiation factor 5-1 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5-like eukaryotic translation initiation factor 5-like probable eukaryotic translation initiation factor 5-1 probable eukaryotic translation initiation factor 5-2 probable eukaryotic translation initiation factor 5-2 uncharacterized protein eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5-like eukaryotic translation initiation factor 5-like eukaryotic translation initiation factor 5-like eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5 eukaryotic translation initiation factor 5-like eukaryotic translation initiation factor 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 4
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03015 mRNA surveillance pathway 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04626 Plant-pathogen interaction 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03060 Protein export 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00340 Histidine metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03040 Spliceosome 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03040 Spliceosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03250 Viral life cycle - HIV-1 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00543 Exopolysaccharide biosynthesis 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844119 840582 100778073 100796565 101262596 101262974 9272123 4346742 100382117 542450 103875083 103848723 100262554 100263898 18097599 18099419 11427568 123138106 123143745 123406361 123404681 107905027 106400294 106353452 5722189 8074633 102586907 102601530 102616026 102606845 100831458 107780869 107800674
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