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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   542865   dehydration-responsive element-binding protein 
 osa-u.5   4328044   uncharacterized LOC4328044 
 osa-u.5   4339840   uncharacterized LOC4339840 
 zma-u.5   103638205   Helicase protein MOM1 
 gma-u.5   100810773   helicase protein MOM1 
 gma-u.5   100813574   chromodomain-helicase-DNA-binding protein 8 
 sly-u.5   101246671   uncharacterized LOC101246671 
 sly-u.5   101255404   helicase protein MOM1-like 
 vvi-u.5   100258707   helicase protein MOM1 
 ppo-u.5   7465229   helicase protein MOM1 
 ppo-u.5   18098215   helicase protein MOM1-like 
 mtr-u.5   25499318   chromodomain-helicase-DNA-binding protein 3 
 mtr-u.5   25487831   helicase protein MOM1 
 mtr-u.5   25487826   helicase protein MOM1 

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Top 50 coexpressed genes to 542865 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542865 (tae-r.2 coexpression data)

CoexMap"542865"


taeLOC542865 | Entrez gene ID : 542865    
Species tae osa zma gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot ath bna ghi
Paralog 1 2 1 2 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (437 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (928 genes)  IEA  
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (22 genes)  IEA  
GO:0042393 [list] [network] histone binding  (147 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (441 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (1439 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044355525.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_044355525.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044355525.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
542865

.
osa-u.5
for
4328044

.
osa-u.5
for
4339840

.
zma-u.5
for
103638205

.
gma-u.5
for
100810773

.
gma-u.5
for
100813574

.
sly-u.5
for
101246671

.
sly-u.5
for
101255404

.
vvi-u.5
for
100258707

.
ppo-u.5
for
7465229

.
ppo-u.5
for
18098215

.
mtr-u.5
for
25499318

.
mtr-u.5
for
25487831

.
mtr-u.5
for
25487826

.


Ortholog ID: 3182
Species gma gma sly sly osa osa zma vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi cre sbi sbi sot sot cit bdi bdi nta nta
Symbol LOC100813574 LOC100810773 LOC101246671 LOC101255404 LOC4328044 LOC4339840 LOC103638205 LOC100258707 LOC7465229 LOC18098215 LOC25499318 LOC25487826 LOC123135515 LOC123153948 LOC123406185 LOC123452014 LOC107962768 LOC107943834 CHLRE_12g537671v5 LOC8065356 LOC8066503 LOC102605901 LOC102598312 LOC102618463 LOC100840452 LOC100841039 LOC107778345 LOC107816341
Function* chromodomain-helicase-DNA-binding protein 8 helicase protein MOM1 uncharacterized LOC101246671 helicase protein MOM1-like uncharacterized LOC4328044 uncharacterized LOC4339840 Helicase protein MOM1 helicase protein MOM1 helicase protein MOM1 helicase protein MOM1-like chromodomain-helicase-DNA-binding protein 3 helicase protein MOM1 uncharacterized LOC123135515 uncharacterized LOC123153948 uncharacterized LOC123406185 uncharacterized LOC123452014 helicase protein MOM1 helicase protein MOM1 uncharacterized protein uncharacterized LOC8065356 uncharacterized LOC8066503 protein CHROMATIN REMODELING 4-like helicase protein MOM1-like helicase protein MOM1 CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE-like uncharacterized LOC107778345 uncharacterized LOC107816341
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 3
gma00500 Starch and sucrose metabolism 3
gma03082 ATP-dependent chromatin remodeling 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 3
sly04070 Phosphatidylinositol signaling system 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03040 Spliceosome 2
zma04136 Autophagy - other 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 7
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03082 ATP-dependent chromatin remodeling 3
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03013 Nucleocytoplasmic transport 2
sbi04136 Autophagy - other 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813574 100810773 101246671 101255404 4328044 4339840 103638205 100258707 7465229 18098215 25499318 25487826 123135515 123153948 123406185 123452014 107962768 107943834 5718460 8065356 8066503 102605901 102598312 102618463 100840452 100841039 107778345 107816341
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