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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543489   histone H2B.1-like 
 tae-r.2   123095199   histone H2B.1 
 tae-r.2   123095942   histone H2B.1-like 
 tae-r.2   123165882   histone H2B.3-like 
 hvu-r.1   123440449   histone H2B.1-like 
 hvu-r.1   123440491   histone H2B.1-like 
 bdi-r.1   100846031   histone H2B.1 
 bdi-r.1   100823811   histone H2B.1 
 bdi-r.1   100844075   histone H2B.3 
 osa-u.5   9268195   uncharacterized LOC9268195 
 osa-u.5   4324504   histone H2B.5 
 osa-u.5   107278608   histone H2B.1 
 zma-u.5   100501458   Histone H2B 
 zma-u.5   103647254   histone H2B.5 
 zma-u.5   100501614   uncharacterized LOC100501614 
 sbi-r.1   8057774   histone H2B.4 
 sbi-r.1   8060294   histone H2B.3 
 sbi-r.1   8055359   histone H2B.3 
 ath-u.5   HTB11   Histone superfamily protein 
 ath-u.5   HTB4   Histone superfamily protein 
 gma-u.5   100793796   probable histone H2B.3 
 gma-u.5   100805396   probable histone H2B.3 
 gma-u.5   100806140   probable histone H2B.3 
 sly-u.5   H2B-3   histone H2B.3 
 sly-u.5   101261496   histone H2B 
 sly-u.5   101264987   histone H2B 
 bra-r.6   103845511   histone H2B.10 
 bra-r.6   103841289   histone H2B.8 
 bra-r.6   103829945   histone H2B.8 
 vvi-u.5   100258812   probable histone H2B.1 
 vvi-u.5   100263369   histone H2B.3 
 ppo-u.5   18101345   histone H2B 
 ppo-u.5   18099399   histone H2B 
 mtr-u.5   25492556   probable histone H2B.1 
 mtr-u.5   11442767   probable histone H2B.1 
 mtr-u.5   11432921   probable histone H2B.3 
 ghi-r.1   107905251   probable histone H2B.3 
 ghi-r.1   107906640   histone H2B-like 
 bna-r.1   106346354   histone H2B.2-like 
 bna-r.1   106347524   histone H2B.7 
 bna-r.1   106352612   histone H2B.3 
 sot-r.1   102582527   histone H2B.3-like 
 sot-r.1   102585268   histone H2B.3-like 
 sot-r.1   102585943   histone H2B-like 
 cit-r.1   102629049   histone H2B.3 
 cit-r.1   102624126   histone H2B.4 
 cit-r.1   127902174   histone H2B.3-like 
 nta-r.1   107815679   putative histone H2B.1 
 nta-r.1   107817295   histone H2B 
 nta-r.1   107819596   histone H2B.3 
 cre-r.1   CHLRE_06g264800v5   uncharacterized protein 
 cre-r.1   CHLRE_06g264900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g271376v5   uncharacterized protein 

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Top 50 coexpressed genes to 543489 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543489 (tae-r.2 coexpression data)

CoexMap"543489"


taeLOC543489 | Entrez gene ID : 543489    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 3 3 3 3 2 3 3 3 2 2 3 2 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (566 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (535 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (670 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein NP_001392756.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001392756.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001392756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543489
tae-r.2
for
123095199
tae-r.2
for
123095942
tae-r.2
for
123165882
hvu-r.1
for
123440449
hvu-r.1
for
123440491
bdi-r.1
for
100846031
bdi-r.1
for
100823811
bdi-r.1
for
100844075
osa-u.5
for
9268195
osa-u.5
for
4324504
osa-u.5
for
107278608
zma-u.5
for
100501458
zma-u.5
for
103647254
zma-u.5
for
100501614
sbi-r.1
for
8057774
sbi-r.1
for
8060294
sbi-r.1
for
8055359
ath-u.5
for
HTB11
ath-u.5
for
HTB4
gma-u.5
for
100793796
gma-u.5
for
100805396
gma-u.5
for
100806140
sly-u.5
for
H2B-3
sly-u.5
for
101261496
sly-u.5
for
101264987
bra-r.6
for
103845511
bra-r.6
for
103841289
bra-r.6
for
103829945
vvi-u.5
for
100258812
vvi-u.5
for
100263369
ppo-u.5
for
18101345
ppo-u.5
for
18099399
mtr-u.5
for
25492556
mtr-u.5
for
11442767
mtr-u.5
for
11432921
ghi-r.1
for
107905251
ghi-r.1
for
107906640
bna-r.1
for
106346354
bna-r.1
for
106347524
bna-r.1
for
106352612
sot-r.1
for
102582527
sot-r.1
for
102585268
sot-r.1
for
102585943
cit-r.1
for
102629049
cit-r.1
for
102624126
cit-r.1
for
127902174
nta-r.1
for
107815679
nta-r.1
for
107817295
nta-r.1
for
107819596
cre-r.1
for
CHLRE_06g264800v5
cre-r.1
for
CHLRE_06g264900v5
cre-r.1
for
CHLRE_06g271376v5


Ortholog ID: 42
Species tae tae tae hvu hvu hvu bdi bdi bdi osa osa zma zma zma sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre cre cre
Symbol LOC543489 LOC123143170 LOC123160834 LOC123442703 LOC123442706 LOC123451652 LOC100823811 LOC100844075 LOC100829959 LOC107278608 LOC4345904 LOC103647254 LOC103639304 LOC100192792 LOC8055359 LOC8072250 HTB4 AT2G28720 AT3G53650 LOC100805396 LOC111828532 LOC100499734 LOC101267024 H2B-1 LOC103841289 LOC103829764 LOC103851535 LOC100263369 LOC100251955 LOC18101340 LOC11431194 LOC25492748 LOC25485824 LOC107963943 LOC107948824 LOC107963944 LOC106347524 LOC106440705 LOC106405890 LOC102590470 LOC102601239 LOC107057692 LOC102624126 LOC102608311 LOC107804465 LOC107790383 LOC107777582 CHLRE_17g713450v5 CHLRE_17g711750v5 CHLRE_06g275800v5
Function* histone H2B.1-like histone H2B.3-like histone H2B.3-like histone H2B.4-like histone H2B.4-like histone H2B.4-like histone H2B.1 histone H2B.3 histone H2B.1 histone H2B.1 histone H2B.2-like histone H2B.5 histone H2B.1-like Histone H2B histone H2B.3 histone H2B.1 Histone superfamily protein Histone superfamily protein Histone superfamily protein probable histone H2B.3 probable histone H2B probable histone H2B.3 histone H2B.3-like histone H2B histone H2B.8 histone H2B.3 histone H2B.7 histone H2B.3 probable histone H2B.1-like probable histone H2B.3 probable histone H2B.3 probable histone H2B.2 probable histone H2B.3 histone H2B-like histone H2B-like probable histone H2B.1 histone H2B.7 histone H2B.8 histone H2B.7 histone H2B-like histone H2B histone H2B.1 histone H2B.4 histone H2B-like histone H2B histone H2B-like histone H2B.3 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 543489 123143170 123160834 123442703 123442706 123451652 100823811 100844075 100829959 107278608 4345904 103647254 103639304 100192792 8055359 8072250 836113 817421 28719403 100805396 111828532 100499734 101267024 778282 103841289 103829764 103851535 100263369 100251955 18101340 11431194 25492748 25485824 107963943 107948824 107963944 106347524 106440705 106405890 102590470 102601239 107057692 102624126 102608311 107804465 107790383 107777582 5725960 66056963 5716755
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