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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   543718   5-formyltetrahydrofolate cycloligase 
 sly-r.6   543718   5-formyltetrahydrofolate cycloligase 
 sly-m.5   543718   5-formyltetrahydrofolate cycloligase 
 ath-u.5   5-FCL   5-formyltetrahydrofolate cycloligase 
 gma-u.5   100777775   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 
 gma-u.5   100527426   putative 5-formyltetrahydrofolate cycloligase 
 vvi-u.5   100241674   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 
 ppo-u.5   7483458   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 
 mtr-u.5   25480530   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 
 osa-u.5   4343714   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 
 zma-u.5   103647771   5-formyltetrahydrofolate cyclo-ligase, mitochondrial 

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Top 50 coexpressed genes to 543718 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543718 (sly-u.5 coexpression data)

CoexMap"543718"


slyLOC543718 | Entrez gene ID : 543718      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00670 [list] [network] One carbon pool by folate (40 genes)
sly04981 [list] [network] Folate transport and metabolism (45 genes)
GO BP
GO:0009396 [list] [network] folic acid-containing compound biosynthetic process  (9 genes)  IEA  
GO:0035999 [list] [network] tetrahydrofolate interconversion  (13 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO MF
GO:0030272 [list] [network] 5-formyltetrahydrofolate cyclo-ligase activity  (1 genes)  IEA  
Protein NP_001234731.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001234731.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_001234731.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
543718

.
sly-r.6
for
543718

.
sly-m.5
for
543718

.
ath-u.5
for
5-FCL

.
gma-u.5
for
100777775

.
gma-u.5
for
100527426

.
vvi-u.5
for
100241674

.
ppo-u.5
for
7483458

.
mtr-u.5
for
25480530

.
osa-u.5
for
4343714

.
zma-u.5
for
103647771

.


Ortholog ID: 6347
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol 5-FCL LOC100777775 LOC100527426 LOC543718 LOC4343714 LOC103647771 LOC103850842 LOC103846608 LOC100241674 LOC7483458 LOC25480530 LOC123052297 LOC123044437 LOC123425571 LOC107916295 LOC107927316 LOC106372386 LOC106383978 CHLRE_09g403293v5 LOC8058353 LOC102601010 LOC102628227 LOC102622960 LOC100842725 LOC107813911 LOC107818051
Function* 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate cyclo-ligase, mitochondrial putative 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like uncharacterized protein 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 2
ath00062 Fatty acid elongation 2
ath01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00480 Glutathione metabolism 4
gma00270 Cysteine and methionine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03440 Homologous recombination 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 2
gma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00670 One carbon pool by folate 2
sly03040 Spliceosome 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa00053 Ascorbate and aldarate metabolism 2
osa00480 Glutathione metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
zma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra01200 Carbon metabolism 3
bra00670 One carbon pool by folate 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 4
vvi01212 Fatty acid metabolism 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04145 Phagosome 2
vvi00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
tae00670 One carbon pool by folate 3
tae04981 Folate transport and metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00670 One carbon pool by folate 3
tae04981 Folate transport and metabolism 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00670 One carbon pool by folate 3
bna04981 Folate transport and metabolism 3
bna00053 Ascorbate and aldarate metabolism 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00670 One carbon pool by folate 3
bna04981 Folate transport and metabolism 3
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi01200 Carbon metabolism 3
sbi04145 Phagosome 2
sbi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit04144 Endocytosis 2
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta00230 Purine metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831144 100777775 100527426 543718 4343714 103647771 103850842 103846608 100241674 7483458 25480530 123052297 123044437 123425571 107916295 107927316 106372386 106383978 5723199 8058353 102601010 102628227 102622960 100842725 107813911 107818051
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