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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   LeNRT2.3   nitrate transporter NRT2.3 
 sly-r.6   LeNRT2.3   nitrate transporter NRT2.3 
 sly-m.5   LeNRT2.3   nitrate transporter NRT2.3 
 sly-u.5   101251152   high affinity nitrate transporter 2.4-like 
 sly-u.5   NRT2.2   putative high-affinity nitrate transporter 
 nta-r.1   107772688   high affinity nitrate transporter 2.4-like 
 nta-r.1   107791911   high affinity nitrate transporter 2.4-like 
 nta-r.1   107791741   high affinity nitrate transporter 2.4-like 
 ath-u.5   NRT2:1   nitrate transporter 2:1 
 ath-u.5   NRT2.5   nitrate transporter2.5 
 gma-u.5   100782969   high affinity nitrate transporter 2.4 
 gma-u.5   100787888   high affinity nitrate transporter 2.5 
 gma-u.5   100807710   high affinity nitrate transporter 2.4 
 bra-r.6   103836405   high-affinity nitrate transporter 2.1-like 
 bra-r.6   103843416   high-affinity nitrate transporter 2.1 
 bra-r.6   103833494   high affinity nitrate transporter 2.6 
 vvi-u.5   100260250   high affinity nitrate transporter 2.5 
 ppo-u.5   7457764   high affinity nitrate transporter 2.5 
 mtr-u.5   25492414   high-affinity nitrate transporter 2.1 
 mtr-u.5   25492416   high-affinity nitrate transporter 2.1 
 mtr-u.5   25501481   high affinity nitrate transporter 2.5 
 ghi-r.1   107887983   high-affinity nitrate transporter 2.1 
 ghi-r.1   107906266   high-affinity nitrate transporter 2.1 
 bna-r.1   106382366   high affinity nitrate transporter 2.5 
 bna-r.1   106429961   high affinity nitrate transporter 2.7 
 bna-r.1   106427788   high affinity nitrate transporter 2.6 
 cit-r.1   102627329   high affinity nitrate transporter 2.7 
 cit-r.1   102613311   high affinity nitrate transporter 2.4-like 
 osa-u.5   4328051   high-affinity nitrate transporter 2.1 
 osa-u.5   4324249   high-affinity nitrate transporter 2.3-like 
 osa-u.5   4328052   high-affinity nitrate transporter 2.1-like 
 zma-u.5   103636218   high-affinity nitrate transporter 2.3 
 zma-u.5   606442   putative high affinity nitrate transporter 
 zma-u.5   542092   nitrate transport 2 
 tae-r.2   123140792   high-affinity nitrate transporter 2.1 
 hvu-r.1   123402644   high-affinity nitrate transporter 2.1-like 
 hvu-r.1   123402733   high-affinity nitrate transporter 2.1-like 
 hvu-r.1   123403185   high-affinity nitrate transporter 2.1-like 
 sbi-r.1   8069516   high-affinity nitrate transporter 2.3 
 sbi-r.1   8066510   high-affinity nitrate transporter 2.1 
 sbi-r.1   8085192   high-affinity nitrate transporter 2.1 
 bdi-r.1   100826356   high-affinity nitrate transporter 2.1 
 cre-r.1   CHLRE_06g277450v5   uncharacterized protein 
 cre-r.1   CHLRE_09g410800v5   uncharacterized protein 
 cre-r.1   CHLRE_09g396000v5   uncharacterized protein 

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Top 50 coexpressed genes to LeNRT2.3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LeNRT2.3 (sly-u.5 coexpression data)

CoexMap"543827"


slyLeNRT2.3 | Entrez gene ID : 543827      
Species sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre sot
Paralog 5 3 2 3 3 1 1 3 2 3 2 3 3 1 3 3 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00910 [list] [network] Nitrogen metabolism (36 genes)
GO BP
GO:0071249 [list] [network] cellular response to nitrate  (7 genes)  IEA  
GO:0015706 [list] [network] nitrate transmembrane transport  (8 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0015112 [list] [network] nitrate transmembrane transporter activity  (15 genes)  IEA  
Protein NP_001234127.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  vacu 3,  chlo 1,  cyto 1,  mito 1,  extr 1,  E.R. 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_001234127.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001234127.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
LeNRT2.3
sly-r.6
for
LeNRT2.3
sly-m.5
for
LeNRT2.3
sly-u.5
for
101251152
sly-u.5
for
NRT2.2
nta-r.1
for
107772688
nta-r.1
for
107791911
nta-r.1
for
107791741
ath-u.5
for
NRT2:1
ath-u.5
for
NRT2.5
gma-u.5
for
100782969
gma-u.5
for
100787888
gma-u.5
for
100807710
bra-r.6
for
103836405
bra-r.6
for
103843416
bra-r.6
for
103833494
vvi-u.5
for
100260250
ppo-u.5
for
7457764
mtr-u.5
for
25492414
mtr-u.5
for
25492416
mtr-u.5
for
25501481
ghi-r.1
for
107887983
ghi-r.1
for
107906266
bna-r.1
for
106382366
bna-r.1
for
106429961
bna-r.1
for
106427788
cit-r.1
for
102627329
cit-r.1
for
102613311
osa-u.5
for
4328051
osa-u.5
for
4324249
osa-u.5
for
4328052
zma-u.5
for
103636218
zma-u.5
for
606442
zma-u.5
for
542092
tae-r.2
for
123140792
hvu-r.1
for
123402644
hvu-r.1
for
123402733
hvu-r.1
for
123403185
sbi-r.1
for
8069516
sbi-r.1
for
8066510
sbi-r.1
for
8085192
bdi-r.1
for
100826356
cre-r.1
for
CHLRE_06g277450v5
cre-r.1
for
CHLRE_09g410800v5
cre-r.1
for
CHLRE_09g396000v5


Ortholog ID: 335
Species sly sly sly sot sot nta ath ath gma gma gma bra bra bra vvi ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa osa zma zma zma hvu hvu sbi sbi cre cre cre
Symbol LOC101247028 LOC101257730 LOC101250864 LOC102588458 LOC102586376 LOC107772688 NRT2.7 NRT2.6 LOC100782969 LOC100807710 NRT2 LOC103843416 NRT2.2 LOC103871558 LOC100261203 LOC7487860 LOC25492414 LOC25492416 LOC25501481 LOC107927062 LOC107927079 LOC107942169 LOC106382366 LOC106429961 LOC106416663 LOC102627329 LOC102613311 LOC4328051 LOC4324249 LOC4328052 LOC606442 LOC542092 LOC103626520 LOC123404086 LOC123440149 LOC8069516 LOC8085192 CHLRE_06g277450v5 CHLRE_09g410800v5 CHLRE_09g396000v5
Function* high affinity nitrate transporter 2.4-like high affinity nitrate transporter 2.7 high affinity nitrate transporter 2.4-like high affinity nitrate transporter 2.4-like high affinity nitrate transporter 2.5 high affinity nitrate transporter 2.4-like high affinity nitrate transporter 2.7 high affinity nitrate transporter 2.6 high affinity nitrate transporter 2.4 high affinity nitrate transporter 2.4 NRT2 protein high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.1-like high affinity nitrate transporter 2.5 high affinity nitrate transporter 2.7 high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.1 high affinity nitrate transporter 2.5 high affinity nitrate transporter 2.3 high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.1 high affinity nitrate transporter 2.5 high affinity nitrate transporter 2.7 high affinity nitrate transporter 2.3-like high affinity nitrate transporter 2.7 high affinity nitrate transporter 2.4-like high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.3-like high-affinity nitrate transporter 2.1-like putative high affinity nitrate transporter nitrate transport 2 high-affinity nitrate transporter 2.1 high-affinity nitrate transporter 2.1-like high-affinity nitrate transporter 2.3 high-affinity nitrate transporter 2.3 high-affinity nitrate transporter 2.1 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 3
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00910 Nitrogen metabolism 4
bra00030 Pentose phosphate pathway 3
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 4
ghi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 5
ghi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 7
bna01240 Biosynthesis of cofactors 7
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 7
osa01310 Nitrogen cycle 5
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 6
zma00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
zma00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00910 Nitrogen metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247028 101257730 101250864 102588458 102586376 107772688 831308 823641 100782969 100807710 547946 103843416 103871557 103871558 100261203 7487860 25492414 25492416 25501481 107927062 107927079 107942169 106382366 106429961 106416663 102627329 102613311 4328051 4324249 4328052 606442 542092 103626520 123404086 123440149 8069516 8085192 5716267 5722282 5720158
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