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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   543852   translin-associated protein X 
 sly-r.6   543852   translin-associated protein X 
 sly-m.5   543852   translin-associated protein X 
 ath-u.5   AT2G03780   Translin family protein 
 gma-u.5   100776523   translin-associated protein X-like 
 vvi-u.5   100242747   uncharacterized LOC100242747 
 ppo-u.5   7482246   uncharacterized LOC7482246 
 mtr-u.5   11443506   translin-associated protein X 
 osa-u.5   4324369   uncharacterized LOC4324369 
 zma-u.5   100381878   uncharacterized LOC100381878 

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Top 50 coexpressed genes to 543852 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543852 (sly-u.5 coexpression data)

CoexMap"543852"


slyLOC543852 | Entrez gene ID : 543852      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (253 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (778 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein NP_001297008.1 [sequence] [blastp]
XP_069152460.1 [sequence] [blastp]
XP_069152461.1 [sequence] [blastp]
XP_069152462.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1  (predict for NP_001297008.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_069152460.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_069152461.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_069152462.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001297008.1)
mito 6  (predict for XP_069152460.1)
mito 6  (predict for XP_069152461.1)
mito 6  (predict for XP_069152462.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
543852

.
sly-r.6
for
543852

.
sly-m.5
for
543852

.
ath-u.5
for
AT2G03780

.
gma-u.5
for
100776523

.
vvi-u.5
for
100242747

.
ppo-u.5
for
7482246

.
mtr-u.5
for
11443506

.
osa-u.5
for
4324369

.
zma-u.5
for
100381878

.


Ortholog ID: 8864
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G03780 LOC100776523 LOC543852 LOC4324369 LOC100381878 LOC103839382 LOC100242747 LOC7482246 LOC11443506 LOC123061044 LOC123069634 LOC123443467 LOC107887381 LOC107936360 LOC106427009 LOC106418594 CHLRE_12g527850v5 LOC110434180 LOC102600558 TRAX LOC100843762 LOC107817108 LOC107830935
Function* Translin family protein translin-associated protein X-like translin-associated protein X uncharacterized LOC4324369 uncharacterized LOC100381878 translin-associated protein X uncharacterized LOC100242747 uncharacterized LOC7482246 translin-associated protein X translin-associated protein X translin-associated protein X translin-associated protein X translin-associated protein X translin-associated protein X translin-associated protein X-like translin-associated protein X uncharacterized protein translin-associated protein X translin-associated protein X translin-associated factor X translin-associated protein X uncharacterized LOC107817108 uncharacterized LOC107830935
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 9
tae01230 Biosynthesis of amino acids 9
tae00261 Monobactam biosynthesis 5
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae03050 Proteasome 4
tae00261 Monobactam biosynthesis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03030 DNA replication 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna00860 Porphyrin metabolism 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna00860 Porphyrin metabolism 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi03010 Ribosome 4
bdi00300 Lysine biosynthesis 3
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 4
nta03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 4
nta03050 Proteasome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814905 100776523 543852 4324369 100381878 103839382 100242747 7482246 11443506 123061044 123069634 123443467 107887381 107936360 106427009 106418594 5722455 110434180 102600558 102578022 100843762 107817108 107830935
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