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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   543942   regulator of gene silencing 
 sly-r.6   543942   regulator of gene silencing 
 sly-m.5   543942   regulator of gene silencing 
 sly-u.5   101245711   putative calcium-binding protein CML19 
 sly-u.5   101253669   probable calcium-binding protein CML41 
 ath-u.5   AT3G01830   Calcium-binding EF-hand family protein 
 ath-u.5   CML41   calmodulin-like 41 
 ath-u.5   CML37   calmodulin like 37 
 gma-u.5   100775336   probable calcium-binding protein CML41 
 gma-u.5   100526852   putative calcium-binding protein 
 gma-u.5   100500092   EF hand calcium-binding family protein 
 vvi-u.5   100263254   probable calcium-binding protein CML41 
 vvi-u.5   100247858   putative calcium-binding protein CML19 
 vvi-u.5   100262849   putative calcium-binding protein CML19 
 ppo-u.5   7478001   probable calcium-binding protein CML41 
 ppo-u.5   18109924   probable calcium-binding protein CML41 
 mtr-u.5   120576863   putative calcium-binding protein CML19 
 mtr-u.5   11422542   putative calcium-binding protein CML23 
 mtr-u.5   11406648   probable calcium-binding protein CML41 
 osa-u.5   4325488   putative calcium-binding protein CML19 
 zma-u.5   103650717   putative calcium-binding protein CML19 

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Top 50 coexpressed genes to 543942 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543942 (sly-u.5 coexpression data)

CoexMap"543942"


slyLOC543942 | Entrez gene ID : 543942      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 3 2 3 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04626 [list] [network] Plant-pathogen interaction (238 genes)
GO BP
GO CC
GO MF
GO:0005509 [list] [network] calcium ion binding  (241 genes)  IEA  
Protein NP_001234570.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  extr 1,  E.R._vacu 1  (predict for NP_001234570.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001234570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
543942

.
sly-r.6
for
543942

.
sly-m.5
for
543942

.
sly-u.5
for
101245711

.
sly-u.5
for
101253669

.
ath-u.5
for
AT3G01830

.
ath-u.5
for
CML41

.
ath-u.5
for
CML37

.
gma-u.5
for
100775336

.
gma-u.5
for
100526852

.
gma-u.5
for
100500092

.
vvi-u.5
for
100263254

.
vvi-u.5
for
100247858

.
vvi-u.5
for
100262849

.
ppo-u.5
for
7478001

.
ppo-u.5
for
18109924

.
mtr-u.5
for
120576863

.
mtr-u.5
for
11422542

.
mtr-u.5
for
11406648

.
osa-u.5
for
4325488

.
zma-u.5
for
103650717

.


Ortholog ID: 348
Species ath ath gma gma sly osa bra bra vvi vvi mtr mtr tae hvu ghi bna cre sbi sot sot cit cit nta nta
Symbol AT3G01830 CML41 LOC100526852 LOC111240476 LOC101245711 LOC4325408 LOC103838742 LOC103832125 LOC100247858 LOC100263254 LOC11406648 LOC11422542 LOC123066711 LOC123409974 LOC107926528 LOC106425621 CHLRE_01g016300v5 LOC8062340 LOC102593849 LOC102603332 LOC102624272 LOC102613838 LOC107823367 LOC107825946
Function* Calcium-binding EF-hand family protein calmodulin-like 41 putative calcium-binding protein putative calcium-binding protein putative calcium-binding protein CML19 probable calcium-binding protein CML31 calcium-binding protein CML37 calcium-binding protein CML39 putative calcium-binding protein CML19 probable calcium-binding protein CML41 probable calcium-binding protein CML41 putative calcium-binding protein CML23 probable calcium-binding protein CML31 probable calcium-binding protein CML25/26 probable calcium-binding protein CML41 probable calcium-binding protein CML41 uncharacterized protein probable calcium-binding protein CML31 putative calcium-binding protein CML19 putative calcium-binding protein CML19 calcium-binding protein CML38-like calcium-binding protein CML39-like putative calcium-binding protein CML41 putative calcium-binding protein CML19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 6
mtr04016 MAPK signaling pathway - plant 3
mtr04070 Phosphatidylinositol signaling system 3
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 12
tae00562 Inositol phosphate metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 7
cre01240 Biosynthesis of cofactors 3
cre01230 Biosynthesis of amino acids 3
cre00900 Terpenoid backbone biosynthesis 3
cre00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 4
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00909 Sesquiterpenoid and triterpenoid biosynthesis 3
cit04626 Plant-pathogen interaction 2
cit00460 Cyanoamino acid metabolism 2
cit00966 Glucosinolate biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820033 824241 100526852 111240476 101245711 4325408 103838742 103832125 100247858 100263254 11406648 11422542 123066711 123409974 107926528 106425621 5715125 8062340 102593849 102603332 102624272 102613838 107823367 107825946
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