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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   PTI6   pathogenesis-related genes transcriptional activator PTI6 
 sly-r.6   PTI6   pathogenesis-related genes transcriptional activator PTI6 
 sly-m.5   PTI6   pathogenesis-related genes transcriptional activator PTI6 
 sly-u.5   CRF6   cytokinin response factor 6 
 sly-u.5   101264747   ethylene-responsive transcription factor CRF1 
 sly-u.5   CRF5   cytokinin response factor 5 
 ath-u.5   CRF5   cytokinin response factor 5 
 ath-u.5   CRF6   cytokinin response factor 6 
 ath-u.5   CRF1   cytokinin response factor 1 
 gma-u.5   100794593   pathogenesis-related genes transcriptional activator PTI6 
 gma-u.5   100783772   ethylene-responsive transcription factor CRF2 
 gma-u.5   100779905   ethylene-responsive transcription factor CRF1 
 vvi-u.5   100246641   pathogenesis-related genes transcriptional activator PTI6 
 vvi-u.5   100248494   ethylene-responsive transcription factor CRF4-like 
 ppo-u.5   18105671   ethylene-responsive transcription factor CRF4 
 ppo-u.5   7472720   ethylene-responsive transcription factor CRF1 
 ppo-u.5   7494656   pathogenesis-related genes transcriptional activator PTI6 
 mtr-u.5   11418481   pathogenesis-related genes transcriptional activator PTI6 
 mtr-u.5   11436858   pathogenesis-related genes transcriptional activator PTI6 
 mtr-u.5   11438409   ethylene-responsive transcription factor CRF2 
 osa-u.5   4326729   ethylene-responsive transcription factor CRF1 
 zma-u.5   103634995   pathogenesis-related genes transcriptional activator PTI6 

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Top 50 coexpressed genes to PTI6 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PTI6 (sly-u.5 coexpression data)

CoexMap"544043"


slyPTI6 | Entrez gene ID : 544043      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 2 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04626 [list] [network] Plant-pathogen interaction (238 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein NP_001233991.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001233991.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001233991.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
PTI6

.
sly-r.6
for
PTI6

.
sly-m.5
for
PTI6

.
sly-u.5
for
CRF6

.
sly-u.5
for
101264747

.
sly-u.5
for
CRF5

.
ath-u.5
for
CRF5

.
ath-u.5
for
CRF6

.
ath-u.5
for
CRF1

.
gma-u.5
for
100794593

.
gma-u.5
for
100783772

.
gma-u.5
for
100779905

.
vvi-u.5
for
100246641

.
vvi-u.5
for
100248494

.
ppo-u.5
for
18105671

.
ppo-u.5
for
7472720

.
ppo-u.5
for
7494656

.
mtr-u.5
for
11418481

.
mtr-u.5
for
11436858

.
mtr-u.5
for
11438409

.
osa-u.5
for
4326729

.
zma-u.5
for
103634995

.


Ortholog ID: 518
Species ath ath gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot sot bdi nta nta
Symbol CRF5 CRF2 LOC100776453 PTI6 LOC101264747 LOC4326729 LOC103634995 LOC103852041 LOC103830314 LOC100255049 LOC7494656 LOC7485212 LOC11436858 LOC11438409 LOC123060741 LOC123065201 LOC123439662 LOC107890696 LOC107952935 LOC106438449 LOC8079479 LOC102591238 LOC102578223 LOC100831723 LOC107767830 LOC107788580
Function* cytokinin response factor 5 cytokinin response factor 2 ethylene-responsive transcription factor CRF2 pathogenesis-related genes transcriptional activator PTI6 ethylene-responsive transcription factor CRF1 ethylene-responsive transcription factor CRF1 pathogenesis-related genes transcriptional activator PTI6 ethylene-responsive transcription factor CRF3 ethylene-responsive transcription factor CRF6 pathogenesis-related genes transcriptional activator PTI6 pathogenesis-related genes transcriptional activator PTI6 ethylene-responsive transcription factor CRF4 pathogenesis-related genes transcriptional activator PTI6 ethylene-responsive transcription factor CRF2 ethylene-responsive transcription factor CRF1 ethylene-responsive transcription factor CRF1-like ethylene-responsive transcription factor CRF1-like ethylene-responsive transcription factor CRF1 ethylene-responsive transcription factor CRF5 ethylene-responsive transcription factor CRF2 ethylene-responsive transcription factor CRF2 ethylene-responsive transcription factor CRF4 pathogenesis-related genes transcriptional activator PTI6 pathogenesis-related genes transcriptional activator PTI6 pathogenesis-related genes transcriptional activator PTI6 ethylene-responsive transcription factor CRF2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 4
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00380 Tryptophan metabolism 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 4
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819239 828475 100776453 544043 101264747 4326729 103634995 103852041 103830314 100255049 7494656 7485212 11436858 11438409 123060741 123065201 123439662 107890696 107952935 106438449 8079479 102591238 102578223 100831723 107767830 107788580
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